Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2183

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
1,073,951	+		GFF2180	0.70	+0.5
1,073,951	+		GFF2180	0.70	+0.3
1,073,951	+		GFF2180	0.70	+0.0
1,073,951	+		GFF2180	0.70	-0.6
1,073,952	-		GFF2180	0.70	-0.9
1,073,952	-		GFF2180	0.70	+0.8
1,073,952	-		GFF2180	0.70	-0.3
1,073,952	-		GFF2180	0.70	-0.1
1,073,952	-		GFF2180	0.70	+0.7
1,074,006	-		GFF2180	0.80	-2.3
1,074,006	-		GFF2180	0.80	+0.7
1,074,029	+		GFF2180	0.84	+0.0
1,074,029	+		GFF2180	0.84	+0.9
1,074,030	-		GFF2180	0.84	+0.1
1,074,366	+		GFF2181	0.25	-0.4
1,074,366	+		GFF2181	0.25	-0.2
1,074,366	+		GFF2181	0.25	+0.3
1,074,367	-		GFF2181	0.25	-0.2
1,074,369	+		GFF2181	0.26	-0.8
1,074,370	-		GFF2181	0.26	-0.3
1,074,370	-		GFF2181	0.26	+0.5
1,074,372	+		GFF2181	0.26	-1.3
1,074,372	+		GFF2181	0.26	+0.7
1,074,372	+		GFF2181	0.26	+0.2
1,074,421	-		GFF2181	0.34	-1.0
1,074,448	-		GFF2181	0.38	+0.2
1,074,513	+		GFF2181	0.48	-0.1
1,074,513	+		GFF2181	0.48	+0.4
1,074,514	-		GFF2181	0.48	+1.5
1,074,514	-		GFF2181	0.48	+0.1
1,074,516	+		GFF2181	0.48	+1.5
1,074,516	+		GFF2181	0.48	-0.9
1,074,517	-		GFF2181	0.49	-0.1
1,074,517	-		GFF2181	0.49	-0.0
1,074,699	+		GFF2181	0.77	-0.3
1,074,699	+		GFF2181	0.77	+0.8
1,074,700	-		GFF2181	0.77	+0.1
1,074,723	+		GFF2181	0.80	+0.7
1,074,724	-		GFF2181	0.81	+0.3
1,074,724	-		GFF2181	0.81	+0.4
1,074,724	-		GFF2181	0.81	+0.4
1,074,729	+		GFF2181	0.81	+0.5
1,074,729	+		GFF2181	0.81	-0.0
1,074,729	+		GFF2181	0.81	-0.7
1,074,729	+		GFF2181	0.81	+1.5
1,074,730	-		GFF2181	0.82	-0.2
1,074,730	-		GFF2181	0.82	+0.1
1,074,730	-		GFF2181	0.82	-0.1
1,074,730	-		GFF2181	0.82	+0.6
1,074,847	-				+0.7
1,074,963	+				+0.7
1,074,964	-				-0.2
1,074,964	-				-0.4
1,074,988	-				+0.4
1,075,060	-		GFF2183	0.11	-0.2
1,075,060	-		GFF2183	0.11	+0.5
1,075,105	-		GFF2183	0.16	-0.0
1,075,404	+		GFF2183	0.45	+0.3
1,075,404	+		GFF2183	0.45	+0.5
1,075,404	+		GFF2183	0.45	+0.2
1,075,405	-		GFF2183	0.45	+0.2
1,075,405	-		GFF2183	0.45	+0.5
1,075,455	+		GFF2183	0.50	+1.4
1,075,455	+		GFF2183	0.50	+0.4
1,075,509	+		GFF2183	0.55	-0.2
1,075,510	-		GFF2183	0.56	-0.0
1,075,554	+		GFF2183	0.60	+0.0
1,075,674	+		GFF2183	0.72	-0.3
1,075,675	-		GFF2183	0.72	+0.9
1,075,716	+		GFF2183	0.76	-0.6
1,075,717	-		GFF2183	0.76	-0.4
1,075,731	+		GFF2183	0.77	-0.4
1,075,917	+				-0.1
1,075,918	-				+0.0
1,075,918	-				-0.3
1,075,959	+				+0.3
1,076,110	-		GFF2184	0.12	+0.3
1,076,260	-		GFF2184	0.27	+0.2
1,076,322	+		GFF2184	0.34	-0.0
1,076,323	-		GFF2184	0.34	+0.1
1,076,751	+		GFF2184	0.78	-0.0
1,076,751	+		GFF2184	0.78	+0.9
1,076,752	-		GFF2184	0.78	-0.2
1,076,752	-		GFF2184	0.78	-0.1
1,076,752	-		GFF2184	0.78	+1.0
1,076,905	-				+0.0
1,076,905	-				-0.7
1,076,928	+				+0.2
1,076,929	-				-0.5
1,076,929	-				+0.4