Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1151

Experiment: Ying_sugar7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 3
6,589	+		GFF1150	0.12	-0.0
6,623	-		GFF1150	0.15	+0.1
6,808	+		GFF1150	0.33	-0.0
6,809	-		GFF1150	0.33	-0.4
6,809	-		GFF1150	0.33	-0.4
6,815	-		GFF1150	0.34	-0.1
7,006	+		GFF1150	0.52	-0.2
7,007	-		GFF1150	0.53	-0.0
7,037	-		GFF1150	0.55	-0.1
7,120	+		GFF1150	0.63	-0.3
7,121	-		GFF1150	0.64	+0.1
7,121	-		GFF1150	0.64	+0.3
7,274	-		GFF1150	0.78	-0.1
7,412	-				-0.3
7,625	+		GFF1151	0.12	-0.3
7,932	-		GFF1151	0.44	+0.4
8,031	-		GFF1151	0.54	-0.5
8,424	-				+0.7
8,575	+		GFF1152	0.17	+0.7
8,576	-		GFF1152	0.17	+0.3
8,885	-		GFF1152	0.60	-1.6
8,899	+		GFF1152	0.62	+0.4
8,899	+		GFF1152	0.62	-1.6
8,899	+		GFF1152	0.62	+0.4
9,067	+		GFF1152	0.85	-0.1
9,067	+		GFF1152	0.85	-0.5
9,067	+		GFF1152	0.85	-0.3
9,067	+		GFF1152	0.85	-0.2
9,067	+		GFF1152	0.85	-0.4
9,068	-		GFF1152	0.85	-0.2
9,068	-		GFF1152	0.85	+0.2
9,091	+		GFF1152	0.88	+0.2
9,127	+				+0.7
9,128	-				+1.1
9,154	+				+0.7
9,155	-				+1.0
9,155	-				+0.7