Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5641

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
2,662,542	-		GFF5640	0.28	-0.1
2,662,611	-		GFF5640	0.34	+1.2
2,662,980	-		GFF5640	0.65	+0.2
2,662,980	-		GFF5640	0.65	+0.7
2,663,937	+		GFF5641	0.50	-0.1
2,664,429	+				+1.4
2,664,677	+		GFF5642	0.25	+1.6
2,664,678	-		GFF5642	0.25	+0.2
2,664,678	-		GFF5642	0.25	+0.6
2,664,698	+		GFF5642	0.28	-0.2
2,664,698	+		GFF5642	0.28	-0.8
2,664,698	+		GFF5642	0.28	+0.0
2,664,861	-		GFF5642	0.46	+1.2
2,665,188	-		GFF5642	0.84	+0.2
2,665,188	-		GFF5642	0.84	+0.2
2,665,244	+				-0.2
2,665,322	+				-0.4
2,665,322	+				-0.2
2,665,323	-				-0.0
2,665,343	-				+2.2
2,665,343	-				-0.2
2,665,343	-				-0.1