Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5263

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
2,276,898	+				-0.7
2,276,955	+				-0.2
2,277,947	+		GFF5263	0.17	-0.4
2,277,947	+		GFF5263	0.17	-0.1
2,277,948	-		GFF5263	0.17	+1.6
2,278,452	-		GFF5263	0.73	-1.4
2,278,452	-		GFF5263	0.73	-0.3
2,278,469	+		GFF5263	0.75	-0.5
2,278,470	-		GFF5263	0.75	-0.6
2,278,470	-		GFF5263	0.75	-0.4
2,278,688	+				+0.1
2,278,688	+				-0.1
2,278,688	+				-0.5
2,279,391	+		GFF5265	0.32	-1.4
2,279,391	+		GFF5265	0.32	+0.0
2,279,392	-		GFF5265	0.32	-0.4
2,279,392	-		GFF5265	0.32	-0.7
2,279,466	+		GFF5265	0.43	+0.4
2,279,467	-		GFF5265	0.43	-0.1