Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4868

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,874,200	+				-0.6
1,874,200	+				-0.4
1,874,200	+				+0.3
1,874,200	+				-0.6
1,874,201	-				-1.0
1,874,201	-				-0.8
1,874,201	-				+0.2
1,874,218	+				-1.1
1,874,218	+				-2.2
1,874,219	-				+0.0
1,874,684	-				-0.8
1,874,700	+				-0.9
1,874,700	+				-1.8
1,874,700	+				+0.2
1,874,700	+				-0.7
1,874,700	+				-0.1
1,874,701	-				+0.3
1,874,701	-				+0.0
1,874,701	-				+0.1
1,874,856	+				+0.2
1,874,856	+				+0.0
1,874,856	+				-0.9
1,874,857	-				-1.0
1,874,857	-				-0.1
1,874,857	-				+0.3
1,874,857	-				-0.0
1,874,967	+		GFF4868	0.18	-0.2
1,874,968	-		GFF4868	0.18	-0.2
1,875,119	+		GFF4868	0.30	-1.0
1,875,120	-		GFF4868	0.31	-0.9
1,875,120	-		GFF4868	0.31	-0.6
1,875,442	-		GFF4868	0.57	-1.3
1,875,523	+		GFF4868	0.64	-0.8
1,875,523	+		GFF4868	0.64	-1.5
1,876,070	+				-0.0
1,876,070	+				+0.1
1,876,070	+				+0.2
1,876,070	+				+0.4
1,876,070	+				+0.9
1,876,071	-				+1.8
1,876,071	-				-0.2
1,876,071	-				+0.5
1,876,951	+				-0.0
1,876,952	-				-0.4