Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4853

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,859,923	-				+0.1
1,859,923	-				+0.4
1,859,923	-				+0.2
1,859,923	-				-0.8
1,859,923	-				+0.3
1,859,923	-				-0.0
1,859,923	-				+0.4
1,859,923	-				-0.1
1,861,090	-				-1.5
1,861,106	-				+0.2
1,861,510	+		GFF4855	0.11	-0.3
1,861,510	+		GFF4855	0.11	-2.3
1,861,510	+		GFF4855	0.11	-0.7
1,861,510	+		GFF4855	0.11	-1.1
1,861,511	-		GFF4855	0.11	+1.8
1,861,624	+		GFF4855	0.24	+0.6
1,861,625	-		GFF4855	0.24	+0.2
1,861,748	-		GFF4855	0.38	-0.4
1,861,748	-		GFF4855	0.38	+0.4
1,862,002	+		GFF4855	0.66	+1.2
1,862,002	+		GFF4855	0.66	+1.0
1,862,002	+		GFF4855	0.66	-0.8
1,862,002	+		GFF4855	0.66	+0.5
1,862,003	-		GFF4855	0.66	+0.6
1,862,003	-		GFF4855	0.66	-0.4
1,862,003	-		GFF4855	0.66	+0.5
1,862,036	-		GFF4855	0.70	+0.1
1,862,036	-		GFF4855	0.70	+0.0