Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4440

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,369,519	-				+0.4
1,369,557	+				-0.6
1,369,557	+				-1.8
1,370,292	+				+0.2
1,370,520	+		GFF4440	0.15	-0.4
1,370,521	-		GFF4440	0.15	-2.4
1,370,941	-		GFF4440	0.46	-1.4
1,371,744	-				-0.2
1,371,897	-		GFF4441	0.30	-0.0
1,371,956	+		GFF4441	0.38	+0.2
1,371,957	-		GFF4441	0.38	+0.6
1,372,070	+		GFF4441	0.54	-0.4
1,372,071	-		GFF4441	0.55	+0.4
1,372,332	-				+0.6