Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4297

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,221,707	-		GFF4296	0.14	-1.3
1,221,707	-		GFF4296	0.14	+0.1
1,221,707	-		GFF4296	0.14	-0.1
1,221,707	-		GFF4296	0.14	-0.8
1,221,741	+		GFF4296	0.17	-1.8
1,221,742	-		GFF4296	0.17	+0.6
1,221,985	+		GFF4296	0.38	+2.2
1,221,985	+		GFF4296	0.38	-0.4
1,221,985	+		GFF4296	0.38	-0.2
1,221,986	-		GFF4296	0.38	+0.5
1,221,986	-		GFF4296	0.38	-0.9
1,222,045	+		GFF4296	0.43	-0.4
1,222,046	-		GFF4296	0.43	-1.8
1,222,057	+		GFF4296	0.44	-1.5
1,222,057	+		GFF4296	0.44	-0.0
1,222,057	+		GFF4296	0.44	-1.1
1,222,058	-		GFF4296	0.44	-0.6
1,222,058	-		GFF4296	0.44	-0.7
1,222,058	-		GFF4296	0.44	+0.2
1,222,058	-		GFF4296	0.44	-0.4
1,222,058	-		GFF4296	0.44	-2.0
1,222,789	-		GFF4297	0.32	-2.0
1,222,891	-		GFF4297	0.68	-0.1
1,222,917	+		GFF4297	0.77	-0.9
1,223,007	+				+0.8
1,223,007	+				-0.6
1,223,007	+				-0.0
1,223,007	+				+0.4
1,223,007	+				-0.5
1,223,007	+				+0.5
1,223,008	-				-0.3
1,223,008	-				-0.6
1,223,020	+				-0.3
1,223,020	+				-0.1
1,223,021	-				-1.1
1,223,038	+				-0.2
1,223,038	+				-0.0
1,223,039	-				-0.2
1,223,150	+				+0.4
1,223,150	+				-0.1
1,223,150	+				+0.4
1,223,150	+				-0.3
1,223,150	+				-0.1
1,223,150	+				+2.0
1,223,150	+				+0.1
1,223,150	+				-0.8
1,223,150	+				+0.9
1,223,150	+				-0.8
1,223,150	+				+1.0
1,223,150	+				-0.4
1,223,150	+				+0.4
1,223,150	+				-0.5
1,223,150	+				+0.2
1,223,150	+				-1.3
1,223,150	+				+0.2
1,223,150	+				-0.2
1,223,150	+				+0.6
1,223,150	+				-1.1
1,223,151	-				-0.1
1,223,151	-				+1.4
1,223,151	-				-0.7
1,223,151	-				-1.6
1,223,151	-				-0.4
1,223,151	-				-2.0
1,223,151	-				+0.1
1,223,151	-				-0.8
1,223,151	-				+0.7
1,223,151	-				-1.6
1,223,151	-				+0.1
1,223,151	-				-0.7
1,223,198	+				-1.4
1,223,199	-				+0.4
1,223,203	+				-1.6
1,223,203	+				-0.6
1,223,204	-				-1.4