Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3807

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
704,621	+				-0.2
704,622	-				+0.9
704,896	+		GFF3806	0.25	+0.2
705,016	+		GFF3806	0.38	+0.1
705,176	-		GFF3806	0.54	+0.1
705,187	+		GFF3806	0.55	+0.4
705,187	+		GFF3806	0.55	-0.7
705,188	-		GFF3806	0.55	+0.2
705,188	-		GFF3806	0.55	+0.3
705,188	-		GFF3806	0.55	-0.6
705,436	+		GFF3806	0.81	-0.1
705,436	+		GFF3806	0.81	+0.1
705,437	-		GFF3806	0.81	+0.1
705,437	-		GFF3806	0.81	-0.9
705,437	-		GFF3806	0.81	-0.3
706,192	-				-0.8
706,469	+				-0.8
706,470	-				-0.7
706,727	+				-0.2
706,728	-				-0.0
706,728	-				-0.3
707,183	+		GFF3808	0.15	-0.3