Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2316

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,200,466	+				+1.0
1,200,466	+				-0.2
1,200,466	+				+0.4
1,200,466	+				+1.1
1,200,467	-				+1.9
1,200,467	-				+0.4
1,200,467	-				+0.5
1,200,708	+				+0.3
1,200,709	-				-0.7
1,201,351	+				+2.5
1,201,352	-				+0.2
1,201,352	-				-0.3
1,201,352	-				+0.1
1,201,352	-				-0.1
1,201,699	-		GFF2316	0.43	-0.3
1,201,699	-		GFF2316	0.43	-0.6
1,202,329	+				+0.5
1,202,329	+				-0.6
1,202,329	+				+0.4
1,202,423	+				-0.1
1,202,424	-				+0.2
1,202,424	-				-0.2
1,202,947	+		GFF2318	0.54	+1.7
1,202,947	+		GFF2318	0.54	-0.4
1,202,947	+		GFF2318	0.54	+0.6
1,202,947	+		GFF2318	0.54	+1.0
1,202,948	-		GFF2318	0.54	-1.0
1,202,948	-		GFF2318	0.54	-0.2
1,202,948	-		GFF2318	0.54	-0.5
1,202,948	-		GFF2318	0.54	+0.1