Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2282

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,166,789	-		GFF2281	0.22	+0.9
1,166,789	-		GFF2281	0.22	-0.4
1,166,920	+		GFF2281	0.33	+0.7
1,167,052	+		GFF2281	0.43	-0.5
1,167,053	-		GFF2281	0.43	+0.2
1,167,053	-		GFF2281	0.43	-0.4
1,167,053	-		GFF2281	0.43	-0.9
1,167,328	+		GFF2281	0.65	-0.3
1,167,328	+		GFF2281	0.65	-0.2
1,167,328	+		GFF2281	0.65	-0.0
1,167,328	+		GFF2281	0.65	+0.3
1,167,329	-		GFF2281	0.65	+0.1
1,167,398	-		GFF2281	0.70	+0.2
1,167,398	-		GFF2281	0.70	-0.5
1,167,409	+		GFF2281	0.71	-1.5
1,167,673	+				-0.2
1,167,674	-				+1.5
1,167,674	-				-0.3
1,167,788	-				-0.1
1,168,031	-		GFF2282	0.25	+0.0
1,168,031	-		GFF2282	0.25	+0.2
1,168,204	+		GFF2282	0.42	+0.0
1,168,204	+		GFF2282	0.42	+0.3
1,168,204	+		GFF2282	0.42	+0.4
1,168,205	-		GFF2282	0.42	-0.7
1,168,205	-		GFF2282	0.42	+0.1
1,168,291	+		GFF2282	0.51	+0.1
1,168,292	-		GFF2282	0.51	-1.3
1,168,292	-		GFF2282	0.51	-0.3
1,168,292	-		GFF2282	0.51	-1.5
1,168,442	-		GFF2282	0.66	+0.3
1,168,442	-		GFF2282	0.66	+0.0
1,168,442	-		GFF2282	0.66	-0.5
1,168,467	-		GFF2282	0.68	-0.1
1,168,489	+		GFF2282	0.71	-1.2
1,168,956	-		GFF2283	0.16	-0.3
1,168,956	-		GFF2283	0.16	+0.2
1,168,956	-		GFF2283	0.16	-0.3
1,168,958	+		GFF2283	0.16	+0.7
1,168,959	-		GFF2283	0.17	-0.6
1,168,959	-		GFF2283	0.17	-0.1
1,169,060	+		GFF2283	0.29	-0.2
1,169,061	-		GFF2283	0.30	+0.3
1,169,061	-		GFF2283	0.30	+0.4
1,169,061	-		GFF2283	0.30	-1.3
1,169,061	-		GFF2283	0.30	+0.2
1,169,102	+		GFF2283	0.35	+0.5
1,169,102	+		GFF2283	0.35	-0.2
1,169,102	+		GFF2283	0.35	-0.3
1,169,144	+		GFF2283	0.40	-0.9
1,169,213	+		GFF2283	0.49	+0.4
1,169,213	+		GFF2283	0.49	+0.3
1,169,214	-		GFF2283	0.49	-0.2
1,169,214	-		GFF2283	0.49	+1.3
1,169,387	+		GFF2283	0.71	+1.1
1,169,387	+		GFF2283	0.71	+0.9
1,169,387	+		GFF2283	0.71	-0.1
1,169,388	-		GFF2283	0.71	+0.9
1,169,388	-		GFF2283	0.71	-0.2
1,169,534	+		GFF2283	0.89	+0.4
1,169,534	+		GFF2283	0.89	-0.0
1,169,534	+		GFF2283	0.89	-0.2
1,169,759	-		GFF2284	0.19	-0.4