Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1593

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
448,006	+		GFF1592	0.77	+0.1
448,121	+				-0.4
448,121	+				+0.1
448,265	-				+0.0
448,265	-				+0.1
448,371	-				+1.4
448,491	-				-0.4
448,556	+				+0.1
448,556	+				-1.2
448,556	+				-0.6
448,556	+				-0.2
448,556	+				+0.2
448,556	+				-0.2
448,556	+				-0.5
448,557	-				-0.0
448,557	-				-0.3
448,557	-				-0.7
448,557	-				+0.7
448,557	-				-0.4
448,557	-				-0.3
448,557	-				+0.8
448,557	-				-0.7
448,557	-				+0.6
448,557	-				+0.1
448,557	-				+0.8
448,557	-				-0.9
448,568	+				-1.8
448,568	+				-0.3
448,737	+		GFF1593	0.24	+1.2
448,738	-		GFF1593	0.25	-0.3
449,079	+		GFF1593	0.81	-1.2
449,151	+				-1.4
449,151	+				-1.3
449,187	+				-0.1
449,187	+				-0.1
449,443	+		GFF1594	0.17	-0.3
449,479	+		GFF1594	0.21	-0.3
449,479	+		GFF1594	0.21	-0.9
449,479	+		GFF1594	0.21	-0.5
449,480	-		GFF1594	0.21	-0.3
449,701	+		GFF1594	0.44	-0.3
449,701	+		GFF1594	0.44	-0.4
449,702	-		GFF1594	0.44	-0.1
449,945	-		GFF1594	0.69	+0.0
449,945	-		GFF1594	0.69	-0.1