Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1047

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
785,277	+		GFF1046	0.73	+0.1
785,278	-		GFF1046	0.73	-0.3
785,364	+		GFF1046	0.79	-0.1
785,622	-				-0.2
785,905	-				+0.9
785,921	-				-2.1
786,028	+				+0.2
786,228	+		GFF1047	0.13	+0.0
786,228	+		GFF1047	0.13	-0.0
786,256	+		GFF1047	0.20	-0.1
786,256	+		GFF1047	0.20	+1.0
786,256	+		GFF1047	0.20	-0.2
786,257	-		GFF1047	0.21	+1.1
786,990	+		GFF1048	0.30	-0.1
786,994	+		GFF1048	0.30	+1.2
787,396	+		GFF1048	0.64	-0.2