Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1047
Experiment: Ying_OrganicAcid7 rep C; time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_OrganicAcid7 rep C; time point 3 |
---|---|---|---|---|---|
remove | |||||
785,277 | + | GFF1046 | 0.73 | +0.1 | |
785,278 | - | GFF1046 | 0.73 | -0.3 | |
785,364 | + | GFF1046 | 0.79 | -0.1 | |
785,622 | - | -0.2 | |||
785,905 | - | +0.9 | |||
785,921 | - | -2.1 | |||
786,028 | + | +0.2 | |||
786,228 | + | GFF1047 | 0.13 | +0.0 | |
786,228 | + | GFF1047 | 0.13 | -0.0 | |
786,256 | + | GFF1047 | 0.20 | -0.1 | |
786,256 | + | GFF1047 | 0.20 | +1.0 | |
786,256 | + | GFF1047 | 0.20 | -0.2 | |
786,257 | - | GFF1047 | 0.21 | +1.1 | |
786,990 | + | GFF1048 | 0.30 | -0.1 | |
786,994 | + | GFF1048 | 0.30 | +1.2 | |
787,396 | + | GFF1048 | 0.64 | -0.2 |
Or see this region's nucleotide sequence