Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1044

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
782,065	+		GFF1042	0.81	+0.1
782,066	-		GFF1042	0.82	+0.2
782,066	-		GFF1042	0.82	-0.5
782,265	-		GFF1043	0.13	+0.1
782,624	+		GFF1043	0.65	+0.4
783,052	+		GFF1044	0.32	-1.6
783,052	+		GFF1044	0.32	-0.4
783,052	+		GFF1044	0.32	-0.8
783,097	-		GFF1044	0.39	+1.0
783,097	-		GFF1044	0.39	-0.7
783,214	+		GFF1044	0.58	-0.3
783,214	+		GFF1044	0.58	-0.3
783,340	+		GFF1044	0.78	+0.1
783,341	-		GFF1044	0.78	-0.6
783,341	-		GFF1044	0.78	-0.5
783,341	-		GFF1044	0.78	-0.1
783,548	+				+0.1
783,548	+				+0.2
783,549	-				-0.3
783,549	-				+1.1
783,549	-				+0.2
783,549	-				+0.1
783,668	+		GFF1045	0.30	-0.3
783,702	-		GFF1045	0.35	+1.8
783,702	-		GFF1045	0.35	+0.6
783,717	-		GFF1045	0.38	+0.4
783,815	+		GFF1045	0.54	-0.3
783,816	-		GFF1045	0.55	+0.8
783,816	-		GFF1045	0.55	+0.5
783,816	-		GFF1045	0.55	+0.1
783,821	+		GFF1045	0.55	+0.9
783,822	-		GFF1045	0.56	-0.3
783,822	-		GFF1045	0.56	-0.1
783,822	-		GFF1045	0.56	+0.7
783,926	+		GFF1045	0.73	+0.1
783,926	+		GFF1045	0.73	+0.2
783,926	+		GFF1045	0.73	+0.2
783,926	+		GFF1045	0.73	-0.6
783,927	-		GFF1045	0.73	-0.3
784,005	-		GFF1045	0.87	-1.0
784,005	-		GFF1045	0.87	-0.2
784,321	-		GFF1046	0.15	+0.2
784,321	-		GFF1046	0.15	+0.2
784,324	+		GFF1046	0.15	-0.4
784,413	+		GFF1046	0.21	+0.2
784,449	+		GFF1046	0.23	-0.8
784,449	+		GFF1046	0.23	+0.2
784,458	-		GFF1046	0.23	-0.3