Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5572

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
2,581,102	+		GFF5570	0.37	+0.5
2,581,102	+		GFF5570	0.37	+1.0
2,581,103	-		GFF5570	0.37	-0.3
2,581,223	-		GFF5570	0.59	+0.2
2,581,240	+		GFF5570	0.62	-0.2
2,581,240	+		GFF5570	0.62	-0.7
2,581,241	-		GFF5570	0.62	-0.2
2,581,535	+		GFF5571	0.19	-0.2
2,581,901	-				-0.3
2,581,901	-				+0.8
2,582,032	+				-0.6
2,582,032	+				+0.3
2,582,032	+				-0.7
2,582,032	+				-0.8
2,582,032	+				+0.0
2,582,032	+				+0.8
2,582,032	+				-0.6
2,582,032	+				+0.0
2,582,032	+				-0.1
2,582,033	-				-0.5
2,582,033	-				-0.2
2,582,033	-				-0.1
2,582,033	-				+0.2
2,582,033	-				-1.0
2,582,033	-				-0.7
2,582,033	-				+0.0
2,582,257	+		GFF5572	0.23	+0.5
2,582,258	-		GFF5572	0.23	-1.1
2,582,258	-		GFF5572	0.23	+0.1
2,582,392	+		GFF5572	0.35	-1.0
2,582,393	-		GFF5572	0.35	-1.0
2,582,395	+		GFF5572	0.36	-0.2
2,582,395	+		GFF5572	0.36	-1.1
2,582,395	+		GFF5572	0.36	-1.4
2,582,395	+		GFF5572	0.36	-0.4
2,582,395	+		GFF5572	0.36	-0.4
2,582,396	-		GFF5572	0.36	-0.5
2,582,396	-		GFF5572	0.36	-0.8
2,582,396	-		GFF5572	0.36	-0.3
2,582,396	-		GFF5572	0.36	-0.7
2,582,396	-		GFF5572	0.36	-0.4
2,582,396	-		GFF5572	0.36	-0.4
2,582,398	+		GFF5572	0.36	-0.4
2,582,398	+		GFF5572	0.36	+1.7
2,582,398	+		GFF5572	0.36	+0.3
2,582,398	+		GFF5572	0.36	-1.1
2,582,399	-		GFF5572	0.36	+0.4
2,582,399	-		GFF5572	0.36	-0.2
2,582,399	-		GFF5572	0.36	-0.7
2,582,399	-		GFF5572	0.36	+0.6
2,582,399	-		GFF5572	0.36	-0.0
2,582,399	-		GFF5572	0.36	-0.8
2,582,399	-		GFF5572	0.36	-1.2
2,582,401	+		GFF5572	0.36	-1.1
2,582,402	-		GFF5572	0.36	+0.2
2,582,491	+		GFF5572	0.44	-0.1
2,582,617	+		GFF5572	0.56	+0.0
2,582,618	-		GFF5572	0.56	+1.9
2,582,671	+		GFF5572	0.61	-2.4
2,582,671	+		GFF5572	0.61	-0.8
2,582,800	+		GFF5572	0.73	+1.8
2,582,800	+		GFF5572	0.73	-0.3
2,582,800	+		GFF5572	0.73	-0.1
2,582,800	+		GFF5572	0.73	-0.4
2,582,801	-		GFF5572	0.73	-1.1
2,582,801	-		GFF5572	0.73	-0.2
2,582,803	+		GFF5572	0.73	+0.4
2,582,803	+		GFF5572	0.73	+0.5
2,582,803	+		GFF5572	0.73	-0.0
2,582,804	-		GFF5572	0.73	-0.3
2,583,077	+				-1.0
2,583,077	+				-0.4
2,583,110	+				-0.5
2,583,111	-				+0.5
2,583,188	+				+0.2
2,583,189	-				+0.0
2,583,189	-				-3.0
2,583,189	-				-0.1
2,583,189	-				-0.0
2,583,198	+				+1.6
2,583,198	+				+0.3
2,583,198	+				-0.2
2,583,198	+				+0.1
2,583,198	+				+0.6
2,583,198	+				+0.6
2,583,198	+				-0.3
2,583,198	+				-0.7
2,583,198	+				+0.5
2,583,198	+				-0.7
2,583,198	+				-0.5
2,583,198	+				-0.5
2,583,198	+				-0.7
2,583,199	-				-0.5
2,583,199	-				-0.1
2,583,199	-				-0.7
2,583,199	-				-0.7
2,583,199	-				+0.9
2,583,199	-				+0.8
2,583,199	-				+0.4
2,583,199	-				+0.6
2,583,199	-				-0.5
2,583,199	-				+0.7
2,583,199	-				-1.0
2,583,199	-				-2.6
2,583,200	-				+0.4
2,583,420	+				-0.9
2,583,438	+				-1.0
2,583,439	-				-0.3
2,583,505	-		GFF5573	0.13	+0.3
2,583,505	-		GFF5573	0.13	-0.4
2,583,607	-		GFF5573	0.19	-0.2
2,583,607	-		GFF5573	0.19	-0.0
2,583,660	+		GFF5573	0.21	+1.3
2,583,661	-		GFF5573	0.21	-0.1
2,583,661	-		GFF5573	0.21	-0.5
2,583,661	-		GFF5573	0.21	+0.5
2,583,661	-		GFF5573	0.21	+0.0
2,583,834	+		GFF5573	0.31	-1.1
2,583,834	+		GFF5573	0.31	-0.0
2,583,835	-		GFF5573	0.31	-0.7