Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5150

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
2,161,196	+				+0.1
2,161,196	+				-0.2
2,161,196	+				+1.0
2,161,196	+				+0.2
2,161,196	+				-0.2
2,161,196	+				-0.6
2,161,196	+				+0.2
2,161,196	+				-0.1
2,161,197	-				-0.2
2,161,197	-				-0.1
2,161,197	-				+0.4
2,161,545	+				-1.6
2,162,100	+		GFF5150	0.23	+0.6
2,162,100	+		GFF5150	0.23	-0.2
2,162,101	-		GFF5150	0.23	+0.6
2,162,376	+		GFF5150	0.31	+0.4
2,162,377	-		GFF5150	0.31	-0.4
2,162,817	+		GFF5150	0.43	-0.1
2,162,817	+		GFF5150	0.43	-0.1
2,162,865	+		GFF5150	0.45	-0.6
2,162,866	-		GFF5150	0.45	-0.0
2,162,866	-		GFF5150	0.45	+0.2
2,162,867	-		GFF5150	0.45	+1.0
2,163,543	+		GFF5150	0.63	-0.7
2,163,544	-		GFF5150	0.63	+0.4
2,164,194	+		GFF5150	0.81	+0.3
2,164,194	+		GFF5150	0.81	+0.4
2,164,203	+		GFF5150	0.82	+0.2
2,164,203	+		GFF5150	0.82	+0.4
2,164,203	+		GFF5150	0.82	-0.6
2,164,203	+		GFF5150	0.82	-0.1
2,164,204	-		GFF5150	0.82	-1.1
2,164,536	+				-0.1
2,164,642	-				+0.3
2,164,642	-				+0.4
2,164,642	-				+0.5
2,164,642	-				-0.5
2,164,642	-				-0.3
2,164,642	-				-0.0
2,164,811	+				-0.1
2,164,811	+				-0.2
2,164,812	-				+0.5
2,164,812	-				+0.3
2,164,982	+				+0.4
2,164,982	+				-1.4
2,164,982	+				+0.7
2,164,982	+				-0.1
2,164,982	+				-0.2
2,164,982	+				-0.2
2,164,982	+				-0.2
2,164,982	+				-0.5
2,164,982	+				+0.2
2,164,982	+				+0.0
2,164,982	+				+0.2
2,164,982	+				-0.5
2,164,982	+				-0.3
2,164,982	+				+0.2
2,164,982	+				-0.8
2,164,983	-				-0.4
2,164,983	-				+0.0
2,164,983	-				+1.1
2,164,983	-				+0.4
2,164,983	-				+0.3
2,164,983	-				-1.4
2,164,983	-				+0.9
2,164,983	-				+0.4
2,164,983	-				-0.5
2,164,983	-				-0.3
2,164,983	-				-0.7
2,164,983	-				-0.1
2,164,983	-				+0.4
2,164,983	-				-0.2
2,164,983	-				+0.4
2,164,983	-				+1.1
2,164,983	-				-0.4
2,164,983	-				+0.1
2,164,983	-				-0.0
2,164,983	-				-0.9
2,164,983	-				-0.9
2,164,983	-				+0.1
2,164,983	-				+0.1
2,164,983	-				-0.3
2,164,983	-				+1.7
2,164,983	-				+1.0
2,164,983	-				-0.8
2,164,983	-				-1.9
2,164,983	-				+0.1
2,164,983	-				+0.7
2,164,983	-				-0.6
2,164,984	+				+0.3
2,164,984	+				-0.0
2,164,984	+				+0.6
2,164,984	+				-0.2
2,164,984	+				+0.2
2,164,984	+				-0.1
2,164,984	+				+0.6
2,164,984	+				-0.1
2,164,984	+				-0.7
2,164,984	+				-0.2
2,164,984	+				-0.8
2,164,984	+				-0.1
2,164,984	+				-0.7
2,164,984	+				+0.5
2,164,985	-				-0.4
2,164,985	-				-0.5
2,164,985	-				+1.0
2,164,985	-				-0.2
2,164,985	-				+0.4
2,164,985	-				-0.8
2,164,985	-				+0.1
2,164,985	-				-0.7
2,164,985	-				+0.3
2,164,985	-				+0.8
2,164,986	+				-0.4
2,164,986	+				-0.3
2,164,986	+				-0.4
2,164,986	+				-0.2
2,164,987	-				-0.4
2,164,987	-				-0.4
2,164,987	-				+0.4
2,164,987	-				-0.3
2,164,987	-				+0.4
2,164,987	-				+0.4
2,164,987	-				-0.1
2,164,987	-				+1.4
2,164,987	-				+0.2
2,165,187	+				+1.0
2,165,187	+				-0.2
2,165,187	+				+0.3
2,165,187	+				+1.4
2,165,187	+				+0.7
2,165,187	+				-1.4
2,165,188	-				+0.1
2,165,188	-				-1.0
2,165,391	+				-0.4
2,165,411	+				+0.0
2,165,429	+				-0.0
2,165,470	+				-1.4
2,165,470	+				+1.4
2,165,471	-				+0.1
2,165,471	-				+0.2
2,165,471	-				-0.4
2,165,471	-				+0.2
2,165,471	-				-1.0
2,165,515	+				-0.2
2,165,515	+				+0.7
2,165,516	-				-0.5
2,165,516	-				+0.6
2,165,705	-				-0.9
2,165,705	-				+0.2
2,165,705	-				-1.3