Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4926

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
1,942,016	-		GFF4925	0.62	-0.8
1,942,016	-		GFF4925	0.62	-1.9
1,942,016	-		GFF4925	0.62	-0.2
1,942,016	-		GFF4925	0.62	-1.5
1,942,016	-		GFF4925	0.62	-2.6
1,942,016	-		GFF4925	0.62	-1.8
1,942,016	-		GFF4925	0.62	-1.6
1,942,153	+		GFF4925	0.68	-0.6
1,942,153	+		GFF4925	0.68	-0.0
1,942,153	+		GFF4925	0.68	-0.6
1,942,154	-		GFF4925	0.68	+0.4
1,942,154	-		GFF4925	0.68	+0.4
1,942,154	-		GFF4925	0.68	-1.2
1,942,154	-		GFF4925	0.68	+0.4
1,942,154	-		GFF4925	0.68	-0.0
1,942,154	-		GFF4925	0.68	-1.9
1,942,154	-		GFF4925	0.68	-2.5
1,942,300	+		GFF4925	0.74	-0.4
1,942,301	-		GFF4925	0.74	-1.5
1,942,624	+		GFF4925	0.88	+0.1
1,942,624	+		GFF4925	0.88	-1.6
1,942,625	-		GFF4925	0.88	-1.4
1,942,625	-		GFF4925	0.88	-1.8
1,942,634	-		GFF4925	0.89	-0.2
1,943,120	+		GFF4926	0.23	+0.2
1,943,120	+		GFF4926	0.23	+0.4
1,943,121	-		GFF4926	0.23	-1.4
1,943,330	+		GFF4926	0.47	+0.2
1,943,331	-		GFF4926	0.47	-0.2
1,943,378	+		GFF4926	0.53	+0.1
1,943,379	-		GFF4926	0.53	-0.7
1,943,379	-		GFF4926	0.53	-0.7
1,943,379	-		GFF4926	0.53	-0.2
1,943,379	-		GFF4926	0.53	-0.5
1,943,576	+		GFF4926	0.76	-0.3
1,943,771	+				+0.2
1,943,771	+				+0.1
1,943,772	-				-0.2
1,943,916	+				+1.1
1,943,916	+				+0.1
1,943,916	+				+1.1
1,943,917	-				+0.1
1,943,917	-				-0.3
1,944,100	+		GFF4927	0.21	+0.0
1,944,101	-		GFF4927	0.21	-0.0
1,944,389	-		GFF4927	0.58	+0.2
1,944,389	-		GFF4927	0.58	+0.3
1,944,389	-		GFF4927	0.58	+0.8
1,944,706	+				-0.3
1,944,706	+				-0.8
1,944,707	-				+0.9
1,944,707	-				+0.4