Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4811

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
1,821,673	-				+0.8
1,821,828	+		GFF4809	0.21	-0.6
1,821,828	+		GFF4809	0.21	+0.6
1,821,829	-		GFF4809	0.21	+0.1
1,821,885	+		GFF4809	0.31	-0.3
1,821,885	+		GFF4809	0.31	-0.2
1,821,885	+		GFF4809	0.31	-0.5
1,821,885	+		GFF4809	0.31	-0.5
1,821,886	-		GFF4809	0.32	-0.1
1,821,886	-		GFF4809	0.32	-0.4
1,821,886	-		GFF4809	0.32	-0.2
1,821,886	-		GFF4809	0.32	+0.6
1,822,077	+		GFF4809	0.66	-0.4
1,822,077	+		GFF4809	0.66	+0.2
1,822,077	+		GFF4809	0.66	-0.3
1,822,077	+		GFF4809	0.66	+0.3
1,822,077	+		GFF4809	0.66	-0.0
1,822,078	-		GFF4809	0.66	+0.6
1,822,078	-		GFF4809	0.66	+0.2
1,822,080	+		GFF4809	0.66	-0.1
1,822,209	+		GFF4809	0.90	+0.8
1,822,209	+		GFF4809	0.90	-0.4
1,822,209	+		GFF4809	0.90	-0.2
1,822,210	-				-0.1
1,822,210	-				+0.4
1,822,210	-				-0.5
1,822,210	-				-0.2
1,822,488	-		GFF4810	0.67	+0.5
1,822,544	+		GFF4810	0.85	-1.8
1,822,544	+		GFF4810	0.85	-0.2
1,822,544	+		GFF4810	0.85	+1.4
1,822,545	-		GFF4810	0.85	+0.2
1,822,545	-		GFF4810	0.85	-1.0
1,822,545	-		GFF4810	0.85	+1.4
1,822,572	-				-0.0
1,822,603	+				-0.4
1,822,603	+				+0.6
1,822,603	+				+0.1
1,822,766	+		GFF4811	0.25	-0.2
1,822,766	+		GFF4811	0.25	-0.2
1,822,766	+		GFF4811	0.25	-0.2
1,822,767	-		GFF4811	0.25	-0.6
1,822,767	-		GFF4811	0.25	+0.1
1,823,225	+				-0.2
1,823,225	+				+0.4
1,823,225	+				-0.1
1,823,225	+				-1.8
1,823,225	+				+0.9
1,823,226	-				-0.3
1,823,673	-		GFF4813	0.15	-0.8
1,823,673	-		GFF4813	0.15	-0.2
1,823,673	-		GFF4813	0.15	-0.1
1,823,785	+		GFF4813	0.28	+0.6
1,823,785	+		GFF4813	0.28	+0.6
1,823,786	-		GFF4813	0.28	-1.3
1,824,130	+		GFF4813	0.70	+0.1
1,824,130	+		GFF4813	0.70	+0.0
1,824,130	+		GFF4813	0.70	+1.1
1,824,130	+		GFF4813	0.70	+0.9
1,824,130	+		GFF4813	0.70	-0.1
1,824,131	-		GFF4813	0.70	-0.6
1,824,131	-		GFF4813	0.70	-0.9
1,824,131	-		GFF4813	0.70	+0.1
1,824,131	-		GFF4813	0.70	-0.1
1,824,131	-		GFF4813	0.70	+0.2
1,824,136	+		GFF4813	0.71	+1.4
1,824,136	+		GFF4813	0.71	+0.4
1,824,136	+		GFF4813	0.71	-0.2
1,824,136	+		GFF4813	0.71	+0.1
1,824,136	+		GFF4813	0.71	-0.2
1,824,136	+		GFF4813	0.71	-0.4
1,824,136	+		GFF4813	0.71	-0.2
1,824,137	-		GFF4813	0.71	+0.1
1,824,137	-		GFF4813	0.71	+1.2
1,824,137	-		GFF4813	0.71	+1.4
1,824,137	-		GFF4813	0.71	-1.0
1,824,137	-		GFF4813	0.71	+0.8
1,824,137	-		GFF4813	0.71	+0.2
1,824,137	-		GFF4813	0.71	-0.2
1,824,137	-		GFF4813	0.71	-0.2
1,824,137	-		GFF4813	0.71	-0.4