Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4659

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
1,609,534	+		GFF4657	0.89	-0.4
1,609,535	-		GFF4657	0.89	-0.0
1,609,739	+		GFF4658	0.11	+0.5
1,609,740	-		GFF4658	0.11	-0.1
1,609,740	-		GFF4658	0.11	-0.8
1,609,772	+		GFF4658	0.15	-0.5
1,609,797	-		GFF4658	0.17	-0.4
1,609,797	-		GFF4658	0.17	-0.8
1,609,832	+		GFF4658	0.22	-0.3
1,609,832	+		GFF4658	0.22	-0.3
1,609,832	+		GFF4658	0.22	-0.3
1,609,832	+		GFF4658	0.22	-0.5
1,609,833	-		GFF4658	0.22	+0.0
1,609,833	-		GFF4658	0.22	-1.0
1,609,833	-		GFF4658	0.22	+0.8
1,609,833	-		GFF4658	0.22	+0.3
1,609,833	-		GFF4658	0.22	+0.3
1,609,833	-		GFF4658	0.22	-0.4
1,609,833	-		GFF4658	0.22	-0.5
1,609,988	+		GFF4658	0.40	-0.2
1,609,988	+		GFF4658	0.40	-1.0
1,609,988	+		GFF4658	0.40	-0.1
1,609,988	+		GFF4658	0.40	+0.8
1,609,988	+		GFF4658	0.40	-1.0
1,609,989	-		GFF4658	0.40	+0.8
1,609,989	-		GFF4658	0.40	-0.2
1,609,989	-		GFF4658	0.40	+1.7
1,609,989	-		GFF4658	0.40	+0.1
1,610,222	+		GFF4658	0.67	+0.2
1,610,427	-				-1.7
1,610,427	-				+0.3
1,610,427	-				+1.0
1,610,427	-				-0.5
1,610,659	+		GFF4659	0.17	+0.1
1,610,660	-		GFF4659	0.17	-0.5
1,610,902	+		GFF4659	0.45	+0.9
1,610,902	+		GFF4659	0.45	-0.1
1,612,345	+				+0.1
1,612,345	+				+0.1
1,612,345	+				-0.5
1,612,346	-				-0.7
1,612,346	-				-0.5
1,612,346	-				-0.4