Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4640

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
1,588,504	+		GFF4639	0.14	+0.4
1,588,505	-		GFF4639	0.14	+0.2
1,588,505	-		GFF4639	0.14	-1.2
1,588,850	-		GFF4639	0.57	+0.3
1,588,850	-		GFF4639	0.57	-1.0
1,589,080	+		GFF4639	0.86	+0.5
1,589,580	+		GFF4640	0.30	-0.6
1,589,581	-		GFF4640	0.30	+0.9
1,590,027	+		GFF4640	0.65	-0.6
1,590,199	-		GFF4640	0.78	-0.4
1,590,554	+				-1.0
1,590,644	+		GFF4641	0.14	+2.9
1,590,645	-		GFF4641	0.15	-0.2
1,590,645	-		GFF4641	0.15	+0.6
1,590,852	-		GFF4641	0.33	+0.6
1,591,008	-		GFF4641	0.47	-1.2