Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4472

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
1,398,667	-		GFF4471	0.69	+0.4
1,398,879	+		GFF4471	0.81	+0.7
1,398,885	+		GFF4471	0.82	+0.2
1,398,886	-		GFF4471	0.82	-0.1
1,399,213	+				+0.2
1,399,246	+				+0.4
1,400,627	+		GFF4472	0.70	+0.3
1,400,657	+		GFF4472	0.71	-0.1
1,400,657	+		GFF4472	0.71	-0.6
1,400,948	+		GFF4472	0.86	-1.1
1,401,159	-				+0.1
1,401,506	+		GFF4473	0.40	-0.2
1,402,097	-				-0.8