Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF654

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
334,399	+		GFF653	0.46	-0.6
334,711	+		GFF653	0.88	+0.5
334,798	+				-0.4
334,846	-				-0.7
334,846	-				-0.9
334,846	-				-0.1
334,846	-				+0.3
334,846	-				+0.8
334,890	+		GFF654	0.22	+0.8
334,890	+		GFF654	0.22	+0.9
334,891	-		GFF654	0.22	+0.6
334,891	-		GFF654	0.22	-0.9
335,019	+		GFF654	0.58	+0.1
335,020	-		GFF654	0.59	-1.3
335,202	+				+0.9
335,203	-				+2.5
335,754	+		GFF655	0.48	+0.1
335,754	+		GFF655	0.48	-0.5
335,754	+		GFF655	0.48	+0.0
335,754	+		GFF655	0.48	+0.7
335,754	+		GFF655	0.48	-0.9
335,755	-		GFF655	0.48	+0.3