Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF629

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
304,741	+		GFF628	0.26	-0.6
304,815	+		GFF628	0.34	-0.2
304,903	+		GFF628	0.43	-0.2
304,904	-		GFF628	0.43	+1.1
304,904	-		GFF628	0.43	+0.2
304,904	-		GFF628	0.43	-0.8
304,996	+		GFF628	0.52	+1.3
304,997	-		GFF628	0.52	-1.5
304,997	-		GFF628	0.52	+0.4
304,997	-		GFF628	0.52	-0.7
305,129	-		GFF628	0.66	-0.1
305,129	-		GFF628	0.66	-0.7
305,147	-		GFF628	0.68	-0.5
305,197	+		GFF628	0.73	+0.3
305,197	+		GFF628	0.73	-0.3
305,299	+		GFF628	0.83	-0.1
305,499	-				-1.5
305,556	-				+0.2
305,953	+		GFF629	0.41	-0.5
306,052	+		GFF629	0.53	+0.9
306,053	-		GFF629	0.53	+0.0
306,053	-		GFF629	0.53	+0.2
306,145	+		GFF629	0.63	+0.7
306,145	+		GFF629	0.63	+0.5
306,157	+		GFF629	0.65	+0.2
306,158	-		GFF629	0.65	+0.1
306,158	-		GFF629	0.65	+1.6
306,370	+		GFF629	0.89	+0.3
306,373	+		GFF629	0.89	+0.3
306,373	+		GFF629	0.89	-0.2
306,373	+		GFF629	0.89	+0.7
306,373	+		GFF629	0.89	-0.0
306,373	+		GFF629	0.89	+0.6
306,374	-		GFF629	0.89	+0.1
306,374	-		GFF629	0.89	-1.1
306,374	-		GFF629	0.89	+0.1
306,374	-		GFF629	0.89	-0.1
306,374	-		GFF629	0.89	+0.4
306,374	-		GFF629	0.89	+0.2
306,376	-		GFF629	0.90	-0.5
306,376	-		GFF629	0.90	-0.0
306,467	+				+0.6
306,467	+				+0.8
306,467	+				-0.2
306,468	-				+0.2
306,630	+				-1.0
306,630	-				-0.3
306,630	-				-0.0
306,737	-				-1.7
307,463	-		GFF630	0.75	-1.0