Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5758

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
2,782,345	+		GFF5756	0.77	+0.4
2,782,346	-		GFF5756	0.77	-0.3
2,782,728	-				-0.4
2,782,832	+		GFF5757	0.19	-1.0
2,782,961	+		GFF5757	0.43	-0.6
2,782,961	+		GFF5757	0.43	-1.1
2,782,962	-		GFF5757	0.43	-0.8
2,783,078	+		GFF5757	0.64	-0.4
2,783,079	-		GFF5757	0.64	+0.9
2,783,079	-		GFF5757	0.64	-0.1
2,783,133	-		GFF5757	0.74	-0.8
2,783,133	-		GFF5757	0.74	-0.1
2,783,162	+		GFF5757	0.79	+0.5
2,783,177	+		GFF5757	0.82	+0.6
2,783,201	+		GFF5757	0.87	+0.3
2,783,380	+		GFF5758	0.11	-1.8
2,783,774	-		GFF5758	0.55	+1.4
2,783,869	+		GFF5758	0.65	+2.4
2,784,376	+				+0.6
2,784,376	+				-1.6
2,784,377	-				-0.1
2,784,377	-				-0.6
2,784,377	-				-0.2
2,784,378	-				+0.1
2,784,517	+		GFF5759	0.20	-0.2
2,784,517	+		GFF5759	0.20	+0.3
2,784,518	-		GFF5759	0.20	-0.6
2,784,518	-		GFF5759	0.20	+0.1
2,784,518	-		GFF5759	0.20	+0.2
2,784,518	-		GFF5759	0.20	-0.5
2,784,518	-		GFF5759	0.20	-0.8
2,784,518	-		GFF5759	0.20	-0.3
2,784,649	+		GFF5759	0.31	+0.1
2,784,764	-		GFF5759	0.41	+0.3
2,785,078	+		GFF5759	0.68	+0.1
2,785,079	-		GFF5759	0.68	+0.4