Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5633

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
2,654,170	+		GFF5633	0.23	+0.1
2,654,170	+		GFF5633	0.23	+1.0
2,655,108	+				-0.1
2,655,364	-		GFF5634	0.24	-0.8
2,655,807	+		GFF5634	0.62	+0.6
2,655,807	+		GFF5634	0.62	+0.4
2,655,825	+		GFF5634	0.63	+0.6
2,655,831	+		GFF5634	0.64	-0.5
2,655,831	+		GFF5634	0.64	-1.3
2,655,831	+		GFF5634	0.64	-0.4
2,655,850	-		GFF5634	0.65	+1.1