Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5630

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
2,648,259	-		GFF5629	0.12	-1.3
2,648,342	+		GFF5629	0.23	+0.5
2,648,343	-		GFF5629	0.23	+0.5
2,648,343	-		GFF5629	0.23	-0.3
2,648,609	+		GFF5629	0.60	-0.9
2,648,610	-		GFF5629	0.60	+0.6
2,648,673	-		GFF5629	0.69	+0.5
2,648,888	+				+0.8
2,648,888	+				+1.5
2,648,889	-				+0.7
2,648,889	-				-0.8
2,649,578	-		GFF5630	0.62	+0.4
2,650,029	-				+0.7
2,650,323	-		GFF5631	0.30	+1.2
2,650,907	+		GFF5631	0.82	+0.1
2,650,907	+		GFF5631	0.82	-0.3
2,650,908	-		GFF5631	0.82	-0.6