Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4847

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
1,854,137	+		GFF4846	0.20	-0.7
1,854,269	+		GFF4846	0.39	+0.6
1,854,270	-		GFF4846	0.39	+0.7
1,854,270	-		GFF4846	0.39	+0.7
1,854,722	-				+0.2
1,854,722	-				+0.5
1,854,722	-				+0.6
1,855,161	-		GFF4847	0.70	+0.6
1,855,161	-		GFF4847	0.70	-1.1
1,855,161	-		GFF4847	0.70	+10.2
1,855,538	+		GFF4848	0.15	-0.4
1,855,538	+		GFF4848	0.15	-0.4
1,855,538	+		GFF4848	0.15	+0.3
1,855,538	+		GFF4848	0.15	+0.2
1,855,538	+		GFF4848	0.15	+0.0
1,855,538	+		GFF4848	0.15	-0.4
1,855,539	-		GFF4848	0.15	+0.2
1,855,539	-		GFF4848	0.15	+0.5
1,855,539	-		GFF4848	0.15	+1.6
1,855,539	-		GFF4848	0.15	-0.1
1,855,539	-		GFF4848	0.15	-0.2
1,855,658	+		GFF4848	0.26	+0.7
1,855,658	+		GFF4848	0.26	+0.6
1,855,659	-		GFF4848	0.26	+0.3
1,855,659	-		GFF4848	0.26	+0.5
1,855,745	+		GFF4848	0.34	+0.0
1,855,745	+		GFF4848	0.34	+0.4
1,855,745	+		GFF4848	0.34	+0.3
1,855,746	-		GFF4848	0.35	-0.0
1,855,805	+		GFF4848	0.40	+0.3
1,855,806	-		GFF4848	0.40	-0.7
1,855,930	+		GFF4848	0.52	-0.1
1,855,930	+		GFF4848	0.52	-0.0
1,855,931	-		GFF4848	0.52	-0.3
1,856,018	+		GFF4848	0.60	-0.6
1,856,018	+		GFF4848	0.60	+0.1
1,856,018	+		GFF4848	0.60	-0.8
1,856,019	-		GFF4848	0.60	-1.1
1,856,019	-		GFF4848	0.60	-0.5
1,856,019	-		GFF4848	0.60	+0.8
1,856,019	-		GFF4848	0.60	-0.8
1,856,019	-		GFF4848	0.60	-0.2
1,856,019	-		GFF4848	0.60	+0.2
1,856,019	-		GFF4848	0.60	+0.2
1,856,019	-		GFF4848	0.60	+0.0
1,856,019	-		GFF4848	0.60	+0.9
1,856,019	-		GFF4848	0.60	-0.7
1,856,019	-		GFF4848	0.60	-0.3
1,856,150	+		GFF4848	0.72	+0.0
1,856,150	+		GFF4848	0.72	-0.3
1,856,151	-		GFF4848	0.72	-0.4
1,856,151	-		GFF4848	0.72	-1.6
1,856,300	+		GFF4848	0.86	-0.0
1,856,300	+		GFF4848	0.86	-0.1
1,856,300	+		GFF4848	0.86	-0.4
1,856,301	-		GFF4848	0.86	+0.2
1,856,301	-		GFF4848	0.86	-0.1
1,856,312	+		GFF4848	0.87	-0.7
1,856,312	+		GFF4848	0.87	+1.2
1,856,312	+		GFF4848	0.87	-1.0
1,856,312	+		GFF4848	0.87	+0.7
1,856,312	+		GFF4848	0.87	+0.3
1,856,313	-		GFF4848	0.87	-1.0
1,856,313	-		GFF4848	0.87	-0.5
1,856,313	-		GFF4848	0.87	+0.9
1,856,313	-		GFF4848	0.87	+1.7
1,856,313	-		GFF4848	0.87	-0.1
1,856,313	-		GFF4848	0.87	+0.5