Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4773

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
1,782,548	+		GFF4772	0.52	+0.0
1,782,549	-		GFF4772	0.52	+0.9
1,782,551	+		GFF4772	0.53	+0.1
1,782,552	-		GFF4772	0.53	+0.6
1,782,552	-		GFF4772	0.53	-2.3
1,782,599	+		GFF4772	0.56	-0.2
1,782,600	-		GFF4772	0.56	-2.4
1,782,737	+		GFF4772	0.65	+0.6
1,782,750	-		GFF4772	0.65	-0.8
1,782,750	-		GFF4772	0.65	+0.3
1,782,782	+		GFF4772	0.68	+0.4
1,782,782	+		GFF4772	0.68	-1.1
1,782,783	-		GFF4772	0.68	+0.6
1,782,783	-		GFF4772	0.68	-0.4
1,782,983	+		GFF4772	0.81	-0.3
1,782,984	-		GFF4772	0.81	+0.4
1,783,402	-				+0.2
1,783,408	-				-0.3
1,783,413	+				-0.2
1,783,413	+				-0.2
1,783,414	-				+0.8
1,783,414	-				-0.2
1,783,623	+		GFF4773	0.30	+0.3
1,783,866	+		GFF4773	0.56	-0.4
1,783,866	+		GFF4773	0.56	-0.1
1,783,867	-		GFF4773	0.56	-0.5
1,783,867	-		GFF4773	0.56	+0.3
1,783,867	-		GFF4773	0.56	+0.0
1,784,321	-				-0.5
1,784,689	-		GFF4774	0.26	+0.5
1,784,689	-		GFF4774	0.26	+0.5
1,784,794	-		GFF4774	0.32	+0.6