Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4765

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
1,771,326	+		GFF4764	0.22	-1.6
1,771,327	-		GFF4764	0.23	+0.8
1,771,327	-		GFF4764	0.23	+0.5
1,771,353	+		GFF4764	0.25	-0.3
1,771,938	+		GFF4764	0.73	+0.4
1,771,939	-		GFF4764	0.73	-0.3
1,771,939	-		GFF4764	0.73	+0.3
1,771,947	+		GFF4764	0.74	+0.4
1,771,947	+		GFF4764	0.74	+0.2
1,771,947	+		GFF4764	0.74	-0.1
1,771,947	+		GFF4764	0.74	-0.5
1,771,948	-		GFF4764	0.74	+1.0
1,771,948	-		GFF4764	0.74	+0.8
1,771,948	-		GFF4764	0.74	+0.1
1,771,948	-		GFF4764	0.74	-2.0
1,772,010	+		GFF4764	0.79	-1.1
1,772,031	+		GFF4764	0.81	+0.2
1,772,031	+		GFF4764	0.81	+0.3
1,772,247	+				-0.8
1,772,247	+				-0.7
1,772,248	-				+0.4
1,772,347	+				-1.8
1,772,629	+		GFF4765	0.32	+1.0
1,773,106	+		GFF4765	0.75	+1.5
1,773,106	+		GFF4765	0.75	-0.1
1,773,107	-		GFF4765	0.75	+0.4
1,773,107	-		GFF4765	0.75	+1.8
1,773,107	-		GFF4765	0.75	-0.0
1,773,664	-		GFF4766	0.13	+0.6
1,773,702	+		GFF4766	0.15	+1.2
1,773,702	+		GFF4766	0.15	-2.0
1,773,964	-		GFF4766	0.27	+2.2
1,774,182	+		GFF4766	0.38	+0.1
1,774,182	+		GFF4766	0.38	+0.3
1,774,183	-		GFF4766	0.38	+1.0
1,774,183	-		GFF4766	0.38	+1.2
1,774,183	-		GFF4766	0.38	+0.2