Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4438

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
1,366,221	+		GFF4435	0.82	+0.3
1,367,005	+		GFF4437	0.76	-1.8
1,367,006	-		GFF4437	0.77	+0.2
1,367,435	-		GFF4438	0.14	+0.7
1,367,498	-		GFF4438	0.17	-0.4
1,367,856	+		GFF4438	0.31	+0.8
1,368,069	+		GFF4438	0.40	+0.4
1,368,230	-		GFF4438	0.47	+0.5
1,368,812	-		GFF4438	0.70	+0.2
1,368,940	+		GFF4438	0.75	+0.8
1,369,280	-		GFF4438	0.89	+0.2
1,369,519	-				-0.3
1,369,557	+				+0.4
1,369,557	+				-0.5
1,370,292	+				-0.1
1,370,520	+		GFF4440	0.15	-0.2
1,370,521	-		GFF4440	0.15	-0.1