Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4337

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
1,265,424	+		GFF4336	0.13	-1.0
1,265,424	+		GFF4336	0.13	-2.2
1,265,424	+		GFF4336	0.13	-1.4
1,265,424	+		GFF4336	0.13	+0.4
1,265,424	+		GFF4336	0.13	-1.1
1,265,424	+		GFF4336	0.13	-2.8
1,265,424	+		GFF4336	0.13	-0.6
1,265,424	+		GFF4336	0.13	-1.0
1,265,425	-		GFF4336	0.13	+0.1
1,265,425	-		GFF4336	0.13	+0.4
1,265,425	-		GFF4336	0.13	+0.3
1,265,425	-		GFF4336	0.13	+0.5
1,265,425	-		GFF4336	0.13	-0.4
1,265,425	-		GFF4336	0.13	+0.0
1,265,544	+		GFF4336	0.24	-0.1
1,265,544	+		GFF4336	0.24	-0.3
1,265,544	+		GFF4336	0.24	+0.9
1,265,544	+		GFF4336	0.24	-0.1
1,265,545	-		GFF4336	0.25	-1.0
1,265,545	-		GFF4336	0.25	-0.1
1,265,799	+		GFF4336	0.48	-0.6
1,265,799	+		GFF4336	0.48	+0.0
1,265,799	+		GFF4336	0.48	-0.1
1,265,931	+		GFF4336	0.61	-0.5
1,265,932	-		GFF4336	0.61	+0.2
1,266,037	-		GFF4336	0.71	+1.6
1,266,037	-		GFF4336	0.71	+0.2
1,266,037	-		GFF4336	0.71	+0.4
1,266,216	+		GFF4336	0.87	-1.7
1,266,216	+		GFF4336	0.87	-1.2
1,266,315	+				+0.2
1,266,315	+				-0.3
1,266,315	+				+0.2
1,266,315	+				+0.3
1,266,315	+				-0.9
1,266,316	-				+1.2
1,266,316	-				-0.2
1,266,316	-				+1.2
1,266,506	-		GFF4337	0.16	-1.2
1,266,520	+		GFF4337	0.18	-0.4
1,266,586	+		GFF4337	0.24	-0.8
1,266,587	-		GFF4337	0.24	+0.3
1,266,640	+		GFF4337	0.29	-0.4
1,266,655	+		GFF4337	0.30	+0.3
1,266,656	-		GFF4337	0.31	+1.2
1,266,656	-		GFF4337	0.31	-0.1
1,266,656	-		GFF4337	0.31	-1.1
1,266,676	+		GFF4337	0.32	-0.5
1,266,676	+		GFF4337	0.32	+0.4
1,266,676	+		GFF4337	0.32	-0.1
1,266,676	+		GFF4337	0.32	+0.3
1,266,676	+		GFF4337	0.32	-2.0
1,266,676	+		GFF4337	0.32	+0.2
1,266,677	-		GFF4337	0.33	+0.1
1,266,770	-		GFF4337	0.41	-0.0
1,266,925	+		GFF4337	0.56	-1.0
1,266,925	+		GFF4337	0.56	-1.7
1,267,018	+		GFF4337	0.65	+0.7
1,267,018	+		GFF4337	0.65	-1.7
1,267,018	+		GFF4337	0.65	-0.6
1,267,057	+		GFF4337	0.69	-0.9
1,267,057	+		GFF4337	0.69	-0.8
1,267,057	+		GFF4337	0.69	-0.3
1,267,058	-		GFF4337	0.69	+0.4
1,267,689	+		GFF4338	0.18	+0.3
1,268,118	+		GFF4338	0.45	+1.4
1,268,118	+		GFF4338	0.45	+1.2
1,268,119	-		GFF4338	0.45	+1.7
1,268,223	+		GFF4338	0.52	+0.3
1,268,224	-		GFF4338	0.52	-0.8
1,268,224	-		GFF4338	0.52	+0.7