Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4277

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
1,201,753	-		GFF4276	0.65	-1.8
1,202,154	+		GFF4276	0.87	+0.2
1,202,380	-				-1.6
1,202,380	-				-1.4
1,202,380	-				-1.1
1,202,436	+				+0.3
1,202,436	+				+0.2
1,202,436	+				+0.8
1,202,436	+				+0.5
1,202,437	-				-0.4
1,202,437	-				-0.3
1,202,437	-				-3.4
1,202,437	-				-0.2
1,202,437	-				-0.5
1,202,437	-				-1.8
1,202,437	-				+0.2
1,202,437	-				-2.2
1,202,437	-				-1.8
1,202,459	+				-0.3
1,202,460	-				-2.4
1,202,580	+		GFF4277	0.16	-4.8
1,202,580	+		GFF4277	0.16	-1.2
1,202,580	+		GFF4277	0.16	-2.7
1,202,580	+		GFF4277	0.16	-4.3
1,202,581	-		GFF4277	0.17	-1.2
1,202,740	-		GFF4277	0.49	-2.3
1,202,740	-		GFF4277	0.49	-2.4
1,202,856	+		GFF4277	0.73	-1.8
1,202,856	+		GFF4277	0.73	-3.5
1,202,856	+		GFF4277	0.73	-1.7
1,202,857	-		GFF4277	0.73	-1.2
1,202,857	-		GFF4277	0.73	-1.4
1,202,857	-		GFF4277	0.73	-1.8