Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF39

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
39,074	-		GFF38	0.71	-0.2
39,268	+		GFF38	0.80	-0.2
39,269	-		GFF38	0.80	-1.9
39,508	+				-0.2
39,509	-				-2.3
39,905	-		GFF39	0.17	+1.8
40,084	+		GFF39	0.41	+1.6
40,318	+		GFF39	0.71	-0.0
40,319	-		GFF39	0.71	-0.1
40,319	-		GFF39	0.71	+0.6
40,932	+		GFF40	0.58	-0.2
40,959	+		GFF40	0.62	-0.3
40,960	-		GFF40	0.62	+0.2
41,034	+		GFF40	0.74	+0.9
41,034	+		GFF40	0.74	+0.0
41,281	-				-0.7
41,281	-				+0.2
41,296	-				+0.8