Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3763

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
656,560	+		GFF3762	0.59	-1.9
656,561	-		GFF3762	0.59	+0.8
656,579	-		GFF3762	0.60	-0.9
656,797	+		GFF3762	0.78	-0.1
656,879	-		GFF3762	0.85	-0.5
657,277	+		GFF3763	0.21	-1.8
657,278	-		GFF3763	0.21	+0.8
657,421	+		GFF3763	0.42	+0.2
657,496	+		GFF3763	0.53	+1.0
657,496	+		GFF3763	0.53	-0.2
657,496	+		GFF3763	0.53	-0.4
657,496	+		GFF3763	0.53	-0.6
657,496	+		GFF3763	0.53	+0.6
657,496	+		GFF3763	0.53	-1.1
657,496	+		GFF3763	0.53	+0.5
657,497	-		GFF3763	0.53	+1.0
657,497	-		GFF3763	0.53	+1.0
657,580	+		GFF3763	0.65	-0.4
657,608	-		GFF3763	0.70	-1.3
657,608	-		GFF3763	0.70	-0.4
657,671	-		GFF3763	0.79	+0.4
657,674	-		GFF3763	0.79	+0.7
657,674	-		GFF3763	0.79	+0.2
657,674	-		GFF3763	0.79	+0.9
658,740	-		GFF3764	0.20	+0.5
658,741	-		GFF3764	0.20	+0.3