Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3037

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
113,504	-		GFF3036	0.53	+0.2
113,504	-		GFF3036	0.53	-0.1
113,557	+		GFF3036	0.57	-0.3
113,740	+		GFF3036	0.68	+1.4
113,740	+		GFF3036	0.68	-0.1
113,741	-		GFF3036	0.68	-0.2
113,741	-		GFF3036	0.68	-0.0
113,987	-		GFF3036	0.84	-0.7
114,280	+				+1.4
114,280	+				-1.0
114,338	+				+0.9
114,338	+				+0.4
114,339	-				-0.4
114,933	+		GFF3037	0.78	+0.2
114,933	+		GFF3037	0.78	-0.1
114,933	+		GFF3037	0.78	+0.2
114,933	+		GFF3037	0.78	-0.5
114,933	+		GFF3037	0.78	-1.8
114,933	+		GFF3037	0.78	-0.1
114,933	+		GFF3037	0.78	-0.4
114,934	-		GFF3037	0.78	+0.5
114,934	-		GFF3037	0.78	+0.7
114,934	-		GFF3037	0.78	+0.0
114,934	-		GFF3037	0.78	+0.7
114,934	-		GFF3037	0.78	+1.0
115,362	-		GFF3038	0.82	-0.2
115,402	+				-1.4
115,403	-				+0.3
115,525	+				+0.3
115,570	+				-0.7
115,570	+				+0.4
115,570	+				+0.0
115,570	+				-2.7
115,571	-				+1.4
115,571	-				+0.7
115,571	-				-0.5
115,571	-				+0.2
115,571	-				+0.9
115,602	+				+1.9
115,602	+				+0.2
115,602	+				-0.1
115,603	-				-1.1
115,603	-				+0.4
115,603	-				-1.1
115,603	-				-1.1
115,603	-				+1.1
115,603	-				-0.9