Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2144

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
1,032,385	+		GFF2143	0.44	+0.9
1,032,871	+		GFF2143	0.82	+0.1
1,032,958	+		GFF2143	0.89	-2.2
1,032,958	+		GFF2143	0.89	+0.7
1,032,959	-		GFF2143	0.89	+0.9
1,033,219	-				+0.4
1,033,293	+		GFF2144	0.15	-0.1
1,033,308	+		GFF2144	0.17	+1.0
1,033,404	+		GFF2144	0.28	-0.6
1,033,582	-		GFF2144	0.48	-0.3
1,033,725	+		GFF2144	0.64	-0.7
1,033,726	-		GFF2144	0.64	-0.1
1,033,962	+				-0.3
1,033,962	+				-0.6
1,034,390	+		GFF2145	0.13	-0.5
1,034,391	-		GFF2145	0.14	+0.1
1,034,497	+		GFF2145	0.18	-1.9
1,034,675	+		GFF2145	0.25	-1.5
1,034,676	-		GFF2145	0.25	-0.7