Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2051

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
932,862	+		GFF2050	0.35	-0.9
932,862	+		GFF2050	0.35	+0.9
933,180	+		GFF2050	0.59	+0.0
933,181	-		GFF2050	0.59	-0.9
933,181	-		GFF2050	0.59	+0.7
933,411	+		GFF2050	0.76	-0.2
933,412	-		GFF2050	0.76	+0.4
933,412	-		GFF2050	0.76	-0.9
933,950	+		GFF2051	0.35	-0.7
933,950	+		GFF2051	0.35	+1.3
933,951	-		GFF2051	0.35	+0.2
933,951	-		GFF2051	0.35	-0.4
933,951	-		GFF2051	0.35	-0.3
934,184	+		GFF2051	0.74	-1.0
934,184	+		GFF2051	0.74	-0.0
934,184	+		GFF2051	0.74	+0.3
934,184	+		GFF2051	0.74	-0.4
934,185	-		GFF2051	0.74	-0.4
934,185	-		GFF2051	0.74	+0.3