Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1097

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
16,220	-				+0.1
16,221	-				+0.7
16,331	+				+0.6
16,377	-				-0.1
16,377	-				+1.0
16,436	-				-0.4
16,457	+				+0.2
16,457	+				+0.1
16,465	+				+0.7
16,466	-				-0.1
16,466	-				-1.2
16,474	+				+0.2
16,597	+				+1.2
16,597	+				-0.2
16,597	+				+0.9
16,598	-				+0.2
16,632	+				-0.7
16,672	+				+0.8
16,743	+				+0.0
16,785	-				+1.2
16,836	+				-1.9
17,009	+				-0.2
17,010	-				-0.4
17,010	-				-0.3
17,010	-				-0.3
17,016	+				+0.3
17,017	-				-0.7
17,020	+				+0.5
17,020	+				-0.6
17,021	-				-1.5
17,082	-				-2.9
17,166	+				+0.2
17,166	+				-0.1
17,167	-				+0.5
17,167	-				+0.1
17,167	-				+1.2
17,167	-				-0.6
17,197	-				-0.9
17,324	+				-1.0
17,325	-				+0.8
17,325	-				+0.0
17,360	+				-1.7
17,360	+				-0.2
17,360	+				-0.8
17,360	+				-0.8
17,361	-				-0.1
17,361	-				-0.5
17,361	-				-0.7
17,363	-				+0.4
17,369	+				+0.9
17,399	+		GFF1097	0.11	+0.4
17,400	-		GFF1097	0.11	-1.2
17,400	-		GFF1097	0.11	-0.9
17,427	+		GFF1097	0.13	-1.9
17,427	+		GFF1097	0.13	-1.6
17,428	-		GFF1097	0.13	-0.7
17,507	-		GFF1097	0.16	-0.3
17,527	-		GFF1097	0.17	+0.3
17,586	+		GFF1097	0.20	-1.6
17,587	-		GFF1097	0.20	-0.1
17,619	-		GFF1097	0.22	+0.2
17,630	+		GFF1097	0.22	+0.8
17,631	-		GFF1097	0.22	-0.3
17,717	+		GFF1097	0.27	+0.7
17,718	-		GFF1097	0.27	+0.2
17,718	-		GFF1097	0.27	+1.0
17,743	-		GFF1097	0.28	-0.3
17,752	+		GFF1097	0.28	-0.1
17,753	-		GFF1097	0.28	+1.2
17,788	-		GFF1097	0.30	+0.0
17,837	-		GFF1097	0.32	-1.1
17,838	+		GFF1097	0.32	+1.2
17,839	-		GFF1097	0.33	-0.6
17,839	-		GFF1097	0.33	-0.8
17,839	-		GFF1097	0.33	-0.2
18,024	+		GFF1097	0.41	-0.5
18,025	-		GFF1097	0.41	+0.1
18,059	+		GFF1097	0.43	-0.2
18,128	+		GFF1097	0.46	+1.2
18,128	+		GFF1097	0.46	+0.3
18,128	+		GFF1097	0.46	+0.3
18,128	+		GFF1097	0.46	-0.1
18,200	+		GFF1097	0.50	-0.2
18,201	-		GFF1097	0.50	-0.3
18,204	+		GFF1097	0.50	-0.7
18,205	-		GFF1097	0.50	-0.3
18,208	+		GFF1097	0.50	-0.5
18,208	+		GFF1097	0.50	+0.2
18,209	-		GFF1097	0.50	+0.2
18,279	-		GFF1097	0.54	-0.2
18,279	-		GFF1097	0.54	+0.2
18,324	+		GFF1097	0.56	+0.3
18,325	-		GFF1097	0.56	+0.3
18,680	+		GFF1097	0.73	-0.4
18,680	+		GFF1097	0.73	-0.2
18,680	+		GFF1097	0.73	+0.1
18,681	-		GFF1097	0.73	-0.7
18,852	+		GFF1097	0.81	-0.3
18,890	-		GFF1097	0.83	+0.5
18,890	-		GFF1097	0.83	+0.4
18,890	-		GFF1097	0.83	-0.2
18,890	-		GFF1097	0.83	+1.0
18,890	-		GFF1097	0.83	-0.3
18,906	+		GFF1097	0.84	-0.8
18,906	+		GFF1097	0.84	-0.7
18,909	+		GFF1097	0.84	-0.4
18,910	-		GFF1097	0.84	+0.2
19,011	+		GFF1097	0.89	+0.5
19,011	+		GFF1097	0.89	-2.5
19,162	+				-1.0
19,163	-				+0.9
19,185	+				+0.2
19,185	+				-1.2
19,186	-				-0.7
19,249	-				+0.2
19,252	+				+0.0
19,253	-				+0.7
19,253	-				-0.3
19,291	+				+1.0
19,291	+				-0.1
19,345	-				-0.9
19,345	-				-1.1
19,358	-				+0.2
19,407	-				-1.7
19,505	-				+0.2
19,514	+				-0.2
19,514	+				-0.4
19,545	-				-0.8
19,600	-				+0.4
19,654	+				+0.7
19,655	-				-1.9
19,807	+				-0.2
19,808	-				+0.9
19,880	+				+0.8
19,881	-				-1.3
19,951	+				+0.1
19,952	-				+0.0
20,110	-				-0.3
20,206	-				-0.3