Strain Fitness in Erwinia amylovora T8 around OLJFJH_13390

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-6
2,818,116	+		OLJFJH_13385	0.77	-0.7
2,818,225	+		OLJFJH_13385	0.81	-0.3
2,818,226	-		OLJFJH_13385	0.82	+0.7
2,818,405	+		OLJFJH_13385	0.88	+0.1
2,818,494	+				+0.4
2,818,494	+				+0.5
2,818,495	-				-1.0
2,818,495	-				+0.7
2,818,495	-				-0.7
2,818,495	-				+0.2
2,818,495	-				+1.3
2,818,495	-				+1.6
2,818,500	+				-0.7
2,818,500	+				-0.6
2,818,500	+				-1.7
2,818,500	+				+0.7
2,818,526	+				-0.2
2,818,739	+				-1.6
2,818,747	+				+0.9
2,818,882	-				-0.2
2,818,950	+				+0.5
2,818,951	-				-0.6
2,818,951	-				+1.8
2,819,002	+				-1.9
2,819,039	-				-0.4
2,819,039	-				+1.3
2,819,043	+				+0.3
2,819,043	+				+0.1
2,819,043	+				+0.7
2,819,043	+				+2.2
2,819,103	-				+0.1
2,819,116	+				+1.1
2,819,215	-		OLJFJH_13390	0.20	+3.5
2,819,215	-		OLJFJH_13390	0.20	+0.8
2,819,218	-		OLJFJH_13390	0.20	+1.7
2,819,392	-		OLJFJH_13390	0.47	+0.2
2,819,493	+		OLJFJH_13390	0.63	-2.6
2,819,518	+		OLJFJH_13390	0.67	-0.0
2,819,519	-		OLJFJH_13390	0.67	+0.3
2,819,649	+		OLJFJH_13390	0.87	-0.7
2,819,650	-		OLJFJH_13390	0.87	+1.4
2,819,650	-		OLJFJH_13390	0.87	-1.0
2,819,773	+				+0.9
2,819,834	+				-2.4
2,819,834	+				-1.4
2,819,835	-				-0.6
2,820,020	+				-2.0
2,820,069	+				-1.0
2,820,070	-				-0.8
2,820,074	-				+0.0
2,820,356	+				+2.3
2,820,407	+				-0.2
2,820,407	+				+2.8
2,820,474	-				+0.4
2,820,536	+		OLJFJH_13395	0.11	-0.5
2,820,537	-		OLJFJH_13395	0.11	-0.3
2,820,539	-		OLJFJH_13395	0.12	-3.3
2,820,575	+		OLJFJH_13395	0.14	-1.1
2,820,576	-		OLJFJH_13395	0.14	+0.1