Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_11520 and OLJFJH_11525 are separated by 139 nucleotides OLJFJH_11525 and OLJFJH_11530 are separated by 73 nucleotides OLJFJH_11530 and OLJFJH_11535 are separated by 2 nucleotides
OLJFJH_11520: OLJFJH_11520 - nicotinamide mononucleotide deamidase-related protein YfaY, at 2,406,544 to 2,407,734
_11520
OLJFJH_11525: OLJFJH_11525 - hypothetical protein, at 2,407,874 to 2,408,131
_11525
OLJFJH_11530: OLJFJH_11530 - class I ribonucleotide reductase maintenance protein YfaE, at 2,408,205 to 2,408,465
_11530
OLJFJH_11535: OLJFJH_11535 - ribonucleotide-diphosphate reductase subunit beta, at 2,408,468 to 2,409,598
_11535
Position (kb)
2408
2409 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2407.341 kb on + strand, within OLJFJH_11520 at 2407.341 kb on + strand, within OLJFJH_11520 at 2407.342 kb on - strand, within OLJFJH_11520 at 2407.342 kb on - strand, within OLJFJH_11520 at 2407.398 kb on + strand, within OLJFJH_11520 at 2407.398 kb on + strand, within OLJFJH_11520 at 2407.398 kb on + strand, within OLJFJH_11520 at 2407.398 kb on + strand, within OLJFJH_11520 at 2407.398 kb on + strand, within OLJFJH_11520 at 2407.399 kb on - strand, within OLJFJH_11520 at 2407.399 kb on - strand, within OLJFJH_11520 at 2407.463 kb on + strand, within OLJFJH_11520 at 2407.660 kb on - strand at 2407.660 kb on - strand at 2407.660 kb on - strand at 2407.660 kb on - strand at 2407.660 kb on - strand at 2407.875 kb on + strand at 2407.882 kb on - strand at 2407.961 kb on - strand, within OLJFJH_11525 at 2408.005 kb on + strand, within OLJFJH_11525 at 2408.032 kb on - strand, within OLJFJH_11525 at 2408.032 kb on - strand, within OLJFJH_11525 at 2408.050 kb on + strand, within OLJFJH_11525 at 2408.050 kb on + strand, within OLJFJH_11525 at 2408.050 kb on + strand, within OLJFJH_11525 at 2408.051 kb on - strand, within OLJFJH_11525 at 2408.051 kb on - strand, within OLJFJH_11525 at 2408.051 kb on - strand, within OLJFJH_11525 at 2408.051 kb on - strand, within OLJFJH_11525 at 2408.131 kb on + strand at 2408.207 kb on - strand at 2408.207 kb on - strand at 2408.357 kb on - strand, within OLJFJH_11530 at 2408.466 kb on - strand at 2408.466 kb on - strand at 2408.469 kb on + strand at 2408.469 kb on + strand at 2408.470 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-6 remove 2,407,341 + OLJFJH_11520 0.67 +0.2 2,407,341 + OLJFJH_11520 0.67 +0.3 2,407,342 - OLJFJH_11520 0.67 -0.1 2,407,342 - OLJFJH_11520 0.67 -0.2 2,407,398 + OLJFJH_11520 0.72 +0.5 2,407,398 + OLJFJH_11520 0.72 -3.2 2,407,398 + OLJFJH_11520 0.72 -0.0 2,407,398 + OLJFJH_11520 0.72 -2.7 2,407,398 + OLJFJH_11520 0.72 +0.8 2,407,399 - OLJFJH_11520 0.72 +0.9 2,407,399 - OLJFJH_11520 0.72 -0.4 2,407,463 + OLJFJH_11520 0.77 -0.6 2,407,660 - +0.0 2,407,660 - +1.5 2,407,660 - +1.1 2,407,660 - +0.2 2,407,660 - -2.4 2,407,875 + +2.0 2,407,882 - -2.5 2,407,961 - OLJFJH_11525 0.34 +0.7 2,408,005 + OLJFJH_11525 0.51 +0.2 2,408,032 - OLJFJH_11525 0.61 +0.3 2,408,032 - OLJFJH_11525 0.61 -0.3 2,408,050 + OLJFJH_11525 0.68 -0.5 2,408,050 + OLJFJH_11525 0.68 +0.1 2,408,050 + OLJFJH_11525 0.68 +2.0 2,408,051 - OLJFJH_11525 0.69 -3.6 2,408,051 - OLJFJH_11525 0.69 -1.8 2,408,051 - OLJFJH_11525 0.69 +0.7 2,408,051 - OLJFJH_11525 0.69 -0.6 2,408,131 + -1.1 2,408,207 - +1.3 2,408,207 - +1.1 2,408,357 - OLJFJH_11530 0.58 +1.2 2,408,466 - +0.3 2,408,466 - +1.3 2,408,469 + +0.1 2,408,469 + -0.3 2,408,470 - -2.1
Or see this region's nucleotide sequence