Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_10200 and OLJFJH_10205 are separated by 132 nucleotides OLJFJH_10205 and OLJFJH_10210 are separated by 327 nucleotides
OLJFJH_10200: OLJFJH_10200 - ATP-dependent RNA helicase SrmB, at 2,101,034 to 2,102,362
_10200
OLJFJH_10205: OLJFJH_10205 - SAM-dependent methyltransferase, at 2,102,495 to 2,103,232
_10205
OLJFJH_10210: OLJFJH_10210 - Aspartate oxidase, at 2,103,560 to 2,103,925
_10210
Position (kb)
2102
2103
2104 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2101.533 kb on + strand, within OLJFJH_10200 at 2101.534 kb on - strand, within OLJFJH_10200 at 2101.534 kb on - strand, within OLJFJH_10200 at 2101.684 kb on - strand, within OLJFJH_10200 at 2101.687 kb on - strand, within OLJFJH_10200 at 2101.687 kb on - strand, within OLJFJH_10200 at 2101.734 kb on - strand, within OLJFJH_10200 at 2101.734 kb on - strand, within OLJFJH_10200 at 2101.778 kb on - strand, within OLJFJH_10200 at 2101.944 kb on + strand, within OLJFJH_10200 at 2101.944 kb on + strand, within OLJFJH_10200 at 2101.944 kb on + strand, within OLJFJH_10200 at 2101.944 kb on + strand, within OLJFJH_10200 at 2101.944 kb on + strand, within OLJFJH_10200 at 2101.944 kb on + strand, within OLJFJH_10200 at 2101.944 kb on + strand, within OLJFJH_10200 at 2101.945 kb on - strand, within OLJFJH_10200 at 2101.945 kb on - strand, within OLJFJH_10200 at 2102.210 kb on - strand, within OLJFJH_10200 at 2102.400 kb on + strand at 2102.401 kb on - strand at 2102.431 kb on + strand at 2102.432 kb on - strand at 2102.461 kb on + strand at 2102.534 kb on - strand at 2102.793 kb on + strand, within OLJFJH_10205 at 2103.218 kb on + strand at 2103.219 kb on - strand at 2103.400 kb on - strand at 2103.428 kb on - strand at 2103.428 kb on - strand at 2103.434 kb on - strand at 2103.517 kb on + strand at 2103.517 kb on + strand at 2103.517 kb on + strand at 2103.517 kb on + strand at 2103.527 kb on + strand at 2103.613 kb on + strand, within OLJFJH_10210 at 2103.984 kb on + strand at 2104.073 kb on - strand at 2104.084 kb on + strand at 2104.085 kb on - strand at 2104.102 kb on + strand at 2104.131 kb on + strand at 2104.131 kb on + strand at 2104.132 kb on - strand at 2104.152 kb on - strand at 2104.227 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-6 remove 2,101,533 + OLJFJH_10200 0.38 -1.4 2,101,534 - OLJFJH_10200 0.38 +0.5 2,101,534 - OLJFJH_10200 0.38 -1.5 2,101,684 - OLJFJH_10200 0.49 -0.4 2,101,687 - OLJFJH_10200 0.49 -1.1 2,101,687 - OLJFJH_10200 0.49 -0.3 2,101,734 - OLJFJH_10200 0.53 -1.4 2,101,734 - OLJFJH_10200 0.53 -0.2 2,101,778 - OLJFJH_10200 0.56 +0.6 2,101,944 + OLJFJH_10200 0.68 -1.4 2,101,944 + OLJFJH_10200 0.68 +0.9 2,101,944 + OLJFJH_10200 0.68 +0.5 2,101,944 + OLJFJH_10200 0.68 +0.8 2,101,944 + OLJFJH_10200 0.68 -0.9 2,101,944 + OLJFJH_10200 0.68 +0.6 2,101,944 + OLJFJH_10200 0.68 +1.1 2,101,945 - OLJFJH_10200 0.69 +3.1 2,101,945 - OLJFJH_10200 0.69 -2.4 2,102,210 - OLJFJH_10200 0.88 -1.8 2,102,400 + -0.0 2,102,401 - -0.3 2,102,431 + +0.9 2,102,432 - -0.2 2,102,461 + +0.1 2,102,534 - -0.9 2,102,793 + OLJFJH_10205 0.40 +1.1 2,103,218 + -1.0 2,103,219 - +0.5 2,103,400 - +0.6 2,103,428 - +0.1 2,103,428 - -1.6 2,103,434 - -0.3 2,103,517 + +0.2 2,103,517 + -0.1 2,103,517 + +0.5 2,103,517 + -1.3 2,103,527 + -0.9 2,103,613 + OLJFJH_10210 0.14 -0.4 2,103,984 + +0.7 2,104,073 - -0.5 2,104,084 + +0.6 2,104,085 - +0.8 2,104,102 + -2.0 2,104,131 + -0.6 2,104,131 + -1.7 2,104,132 - +0.5 2,104,152 - -1.0 2,104,227 - +0.8
Or see this region's nucleotide sequence