Strain Fitness in Erwinia amylovora T8 around OLJFJH_06855

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-6
1,392,318	-		OLJFJH_06845	0.54	+0.9
1,392,340	+		OLJFJH_06845	0.61	+0.5
1,392,371	+		OLJFJH_06845	0.72	+0.3
1,392,386	+		OLJFJH_06845	0.76	-0.4
1,392,411	-		OLJFJH_06845	0.84	-0.4
1,392,457	-				+0.2
1,392,457	-				-1.2
1,392,457	-				+0.6
1,392,470	-				+2.6
1,392,488	+				+0.6
1,392,488	+				+0.7
1,392,488	+				+0.8
1,392,489	-				-0.2
1,392,489	-				-1.8
1,392,519	+				+0.7
1,392,524	-				-1.0
1,392,669	+				-3.6
1,392,669	+				-0.4
1,392,669	+				+1.6
1,392,670	-				-1.8
1,392,674	-				-1.4
1,392,691	+				-1.0
1,392,692	-				-1.1
1,392,707	+				-0.3
1,392,711	+				+0.1
1,392,712	-				-0.3
1,392,773	+				-0.3
1,392,775	+				+1.8
1,392,776	-				+0.4
1,392,776	-				-0.8
1,392,799	+				+0.2
1,392,842	+				+1.0
1,392,858	-				-2.4
1,392,885	+				-0.1
1,392,886	+				-0.7
1,392,887	-				-0.8
1,392,887	-				-1.1
1,392,890	+				+1.1
1,392,891	-				+0.9
1,392,920	+				-1.5
1,392,946	-				+0.7
1,392,969	-				+0.5
1,393,073	-		OLJFJH_06850	0.31	-0.8
1,393,117	-		OLJFJH_06850	0.46	-0.1
1,393,278	-				-1.1
1,393,323	-				+3.7
1,393,323	-				+0.2
1,393,413	-		OLJFJH_06855	0.11	-0.4
1,393,437	+		OLJFJH_06855	0.14	-1.2
1,393,550	+		OLJFJH_06855	0.26	-0.4
1,393,601	-		OLJFJH_06855	0.31	-0.2
1,393,601	-		OLJFJH_06855	0.31	+0.2
1,393,626	-		OLJFJH_06855	0.33	+0.6
1,393,626	-		OLJFJH_06855	0.33	+1.2
1,393,702	-		OLJFJH_06855	0.41	+2.0
1,393,702	-		OLJFJH_06855	0.41	+0.8
1,393,722	-		OLJFJH_06855	0.43	+2.4
1,393,948	-		OLJFJH_06855	0.67	+3.3
1,394,093	-		OLJFJH_06855	0.82	+0.2
1,394,098	-		OLJFJH_06855	0.82	-0.9
1,394,098	-		OLJFJH_06855	0.82	+2.0
1,394,261	-				+0.3
1,394,307	-				+2.6
1,394,308	+				-1.1
1,394,308	+				-0.4
1,394,309	-				-2.3
1,394,312	-				+0.0
1,394,489	-				+1.1
1,394,722	+		OLJFJH_06860	0.17	+1.1
1,394,723	-		OLJFJH_06860	0.17	-0.3
1,394,749	+		OLJFJH_06860	0.20	+0.7
1,394,749	+		OLJFJH_06860	0.20	+0.9
1,394,750	-		OLJFJH_06860	0.20	-0.1
1,394,972	-		OLJFJH_06860	0.45	+0.7