Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_17660 and OLJFJH_17665 are separated by 320 nucleotides OLJFJH_17665 and OLJFJH_17670 are separated by 32 nucleotides OLJFJH_17670 and OLJFJH_17675 are separated by 18 nucleotides OLJFJH_17675 and OLJFJH_17680 are separated by 637 nucleotides
OLJFJH_17660: OLJFJH_17660 - hypothetical protein, at 3,716,514 to 3,716,696
_17660
OLJFJH_17665: OLJFJH_17665 - hypothetical protein, at 3,717,017 to 3,717,226
_17665
OLJFJH_17670: OLJFJH_17670 - Colicin-A, at 3,717,259 to 3,717,660
_17670
OLJFJH_17675: OLJFJH_17675 - colicin immunity protein Cui, at 3,717,679 to 3,718,206
_17675
OLJFJH_17680: OLJFJH_17680 - SDR family oxidoreductase, at 3,718,844 to 3,719,617
_17680
Position (kb) 3717
3718
3719 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 3716.770 kb on - strand at 3716.858 kb on - strand at 3716.860 kb on + strand at 3716.860 kb on + strand at 3716.861 kb on - strand at 3717.045 kb on + strand, within OLJFJH_17665 at 3717.455 kb on + strand, within OLJFJH_17670 at 3717.455 kb on + strand, within OLJFJH_17670 at 3717.455 kb on + strand, within OLJFJH_17670 at 3717.456 kb on - strand, within OLJFJH_17670 at 3717.467 kb on + strand, within OLJFJH_17670 at 3717.467 kb on + strand, within OLJFJH_17670 at 3717.539 kb on + strand, within OLJFJH_17670 at 3717.735 kb on - strand, within OLJFJH_17675 at 3718.032 kb on + strand, within OLJFJH_17675 at 3718.227 kb on + strand at 3718.411 kb on - strand at 3718.738 kb on - strand at 3718.825 kb on - strand at 3719.045 kb on - strand, within OLJFJH_17680 at 3719.053 kb on - strand, within OLJFJH_17680 at 3719.053 kb on - strand, within OLJFJH_17680 at 3719.080 kb on + strand, within OLJFJH_17680 at 3719.081 kb on - strand, within OLJFJH_17680 at 3719.081 kb on - strand, within OLJFJH_17680 at 3719.102 kb on + strand, within OLJFJH_17680 at 3719.103 kb on - strand, within OLJFJH_17680 at 3719.103 kb on - strand, within OLJFJH_17680
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8 remove 3,716,770 - +0.7 3,716,858 - -1.5 3,716,860 + -0.9 3,716,860 + -0.2 3,716,861 - -0.7 3,717,045 + OLJFJH_17665 0.13 +1.3 3,717,455 + OLJFJH_17670 0.49 -1.3 3,717,455 + OLJFJH_17670 0.49 +0.2 3,717,455 + OLJFJH_17670 0.49 +0.3 3,717,456 - OLJFJH_17670 0.49 +0.0 3,717,467 + OLJFJH_17670 0.52 +1.4 3,717,467 + OLJFJH_17670 0.52 +2.3 3,717,539 + OLJFJH_17670 0.70 +0.4 3,717,735 - OLJFJH_17675 0.11 -1.3 3,718,032 + OLJFJH_17675 0.67 -0.5 3,718,227 + -1.7 3,718,411 - +0.4 3,718,738 - +1.7 3,718,825 - -3.4 3,719,045 - OLJFJH_17680 0.26 +0.4 3,719,053 - OLJFJH_17680 0.27 +0.5 3,719,053 - OLJFJH_17680 0.27 +0.4 3,719,080 + OLJFJH_17680 0.30 -1.6 3,719,081 - OLJFJH_17680 0.31 -0.3 3,719,081 - OLJFJH_17680 0.31 -0.9 3,719,102 + OLJFJH_17680 0.33 -1.2 3,719,103 - OLJFJH_17680 0.33 -0.5 3,719,103 - OLJFJH_17680 0.33 -0.3
Or see this region's nucleotide sequence