Strain Fitness in Erwinia amylovora T8 around OLJFJH_16325

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
3,445,179	-				-1.3
3,445,196	+				+0.1
3,445,201	-				-1.6
3,445,236	+				-2.3
3,445,236	+				-0.9
3,445,237	-				-0.2
3,445,237	-				-0.6
3,445,237	-				-0.1
3,445,245	-				-1.1
3,445,424	+				-0.6
3,445,482	+				-0.3
3,445,500	+		OLJFJH_16320	0.11	+2.0
3,445,547	+		OLJFJH_16320	0.17	-0.6
3,445,548	-		OLJFJH_16320	0.17	+0.2
3,445,548	-		OLJFJH_16320	0.17	-0.3
3,445,551	-		OLJFJH_16320	0.18	-0.6
3,445,639	-		OLJFJH_16320	0.30	+0.5
3,445,647	+		OLJFJH_16320	0.31	-0.3
3,445,940	+		OLJFJH_16320	0.72	+2.4
3,445,940	+		OLJFJH_16320	0.72	+2.0
3,445,940	+		OLJFJH_16320	0.72	+0.1
3,445,940	+		OLJFJH_16320	0.72	-0.3
3,445,941	-		OLJFJH_16320	0.72	-1.0
3,445,941	-		OLJFJH_16320	0.72	-0.1
3,445,941	-		OLJFJH_16320	0.72	+1.1
3,445,941	-		OLJFJH_16320	0.72	-0.5
3,446,000	-		OLJFJH_16320	0.80	-0.5
3,446,000	-		OLJFJH_16320	0.80	-0.8
3,446,002	-		OLJFJH_16320	0.80	+3.2
3,446,122	+				-1.0
3,446,122	+				-1.7
3,446,126	-				-0.5
3,446,126	-				+1.8
3,446,226	-		OLJFJH_16325	0.34	-0.6
3,446,379	-		OLJFJH_16325	0.89	-0.8
3,446,379	-		OLJFJH_16325	0.89	-3.4
3,446,391	-				-0.6
3,446,391	-				+0.4
3,446,391	-				+0.0
3,446,505	-				-0.8
3,446,508	-				+0.4
3,446,628	-		OLJFJH_16330	0.14	-0.1
3,446,634	+		OLJFJH_16330	0.16	+0.1
3,446,634	+		OLJFJH_16330	0.16	+1.4
3,446,635	-		OLJFJH_16330	0.17	-1.0
3,446,693	+		OLJFJH_16330	0.39	-1.3
3,446,717	-		OLJFJH_16330	0.48	+0.2
3,446,722	+		OLJFJH_16330	0.50	-0.6
3,446,746	-		OLJFJH_16330	0.59	-2.2
3,446,746	-		OLJFJH_16330	0.59	-2.7
3,446,750	-		OLJFJH_16330	0.60	-0.4
3,446,750	-		OLJFJH_16330	0.60	+0.4
3,447,040	+				-1.9
3,447,041	-				+0.8
3,447,041	-				+3.1
3,447,061	+				-2.0
3,447,062	-				-0.1
3,447,066	-				+0.4
3,447,105	-				+0.1
3,447,187	+				-0.7
3,447,187	+				-1.6
3,447,188	-				+1.7
3,447,216	-				-0.7
3,447,238	+				-0.1
3,447,280	+				+0.4
3,447,281	-				-1.0
3,447,281	-				-0.2
3,447,326	-				-0.2
3,447,350	+		OLJFJH_16335	0.10	-0.6
3,447,350	+		OLJFJH_16335	0.10	-1.1
3,447,351	-		OLJFJH_16335	0.10	+5.2
3,447,373	+		OLJFJH_16335	0.12	-0.9
3,447,374	-		OLJFJH_16335	0.12	-0.7
3,447,405	-		OLJFJH_16335	0.15	-2.4