Strain Fitness in Erwinia amylovora T8 around OLJFJH_16315

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
3,443,696	-		OLJFJH_16310	0.50	+0.9
3,443,867	+		OLJFJH_16310	0.65	-0.2
3,443,867	+		OLJFJH_16310	0.65	-1.5
3,443,868	-		OLJFJH_16310	0.66	-2.4
3,443,868	-		OLJFJH_16310	0.66	+2.5
3,443,927	+		OLJFJH_16310	0.71	-0.1
3,443,974	+		OLJFJH_16310	0.75	+0.1
3,443,975	-		OLJFJH_16310	0.75	+0.2
3,444,007	+		OLJFJH_16310	0.78	-0.4
3,444,077	+		OLJFJH_16310	0.84	+1.4
3,444,078	-		OLJFJH_16310	0.85	-0.0
3,444,082	+		OLJFJH_16310	0.85	-0.1
3,444,083	-		OLJFJH_16310	0.85	+0.2
3,444,134	+		OLJFJH_16310	0.90	+0.8
3,444,135	-		OLJFJH_16310	0.90	-0.2
3,444,234	+				-0.4
3,444,254	+				+1.5
3,444,254	+				-0.9
3,444,348	-				-0.7
3,444,477	-				+0.5
3,444,678	+				+0.6
3,444,679	-				-0.5
3,444,679	-				+1.9
3,444,819	+		OLJFJH_16315	0.30	-0.7
3,445,007	+		OLJFJH_16315	0.69	-1.2
3,445,007	+		OLJFJH_16315	0.69	-0.2
3,445,008	-		OLJFJH_16315	0.69	-1.9
3,445,097	-		OLJFJH_16315	0.88	-1.6
3,445,122	-				-0.4
3,445,179	-				-1.3
3,445,196	+				+0.1
3,445,201	-				-1.6
3,445,236	+				-2.3
3,445,236	+				-0.9
3,445,237	-				-0.2
3,445,237	-				-0.6
3,445,237	-				-0.1
3,445,245	-				-1.1
3,445,424	+				-0.6
3,445,482	+				-0.3
3,445,500	+		OLJFJH_16320	0.11	+2.0
3,445,547	+		OLJFJH_16320	0.17	-0.6
3,445,548	-		OLJFJH_16320	0.17	+0.2
3,445,548	-		OLJFJH_16320	0.17	-0.3
3,445,551	-		OLJFJH_16320	0.18	-0.6
3,445,639	-		OLJFJH_16320	0.30	+0.5
3,445,647	+		OLJFJH_16320	0.31	-0.3
3,445,940	+		OLJFJH_16320	0.72	+2.4
3,445,940	+		OLJFJH_16320	0.72	+2.0
3,445,940	+		OLJFJH_16320	0.72	+0.1
3,445,940	+		OLJFJH_16320	0.72	-0.3
3,445,941	-		OLJFJH_16320	0.72	-1.0
3,445,941	-		OLJFJH_16320	0.72	-0.1
3,445,941	-		OLJFJH_16320	0.72	+1.1
3,445,941	-		OLJFJH_16320	0.72	-0.5
3,446,000	-		OLJFJH_16320	0.80	-0.5
3,446,000	-		OLJFJH_16320	0.80	-0.8
3,446,002	-		OLJFJH_16320	0.80	+3.2
3,446,122	+				-1.0
3,446,122	+				-1.7
3,446,126	-				-0.5
3,446,126	-				+1.8