Strain Fitness in Erwinia amylovora T8 around OLJFJH_16040

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
3,378,712	-				-1.3
3,378,818	+				+0.1
3,378,819	-				-2.0
3,378,917	+				-1.5
3,379,011	-		OLJFJH_16040	0.15	+0.5
3,379,080	-		OLJFJH_16040	0.22	-0.9
3,379,087	-		OLJFJH_16040	0.22	-0.8
3,379,114	+		OLJFJH_16040	0.25	-0.6
3,379,189	+		OLJFJH_16040	0.31	-3.1
3,379,305	-		OLJFJH_16040	0.42	-2.3
3,379,309	+		OLJFJH_16040	0.42	-0.8
3,379,439	+		OLJFJH_16040	0.54	-3.3
3,379,439	+		OLJFJH_16040	0.54	-1.3
3,379,439	+		OLJFJH_16040	0.54	-0.5
3,379,439	+		OLJFJH_16040	0.54	+1.2
3,379,439	+		OLJFJH_16040	0.54	-1.6
3,379,440	-		OLJFJH_16040	0.54	+0.4
3,379,440	-		OLJFJH_16040	0.54	-0.9
3,379,440	-		OLJFJH_16040	0.54	-0.1
3,379,440	-		OLJFJH_16040	0.54	-0.1
3,379,440	-		OLJFJH_16040	0.54	-0.8
3,379,440	-		OLJFJH_16040	0.54	+1.8
3,379,440	-		OLJFJH_16040	0.54	-0.1
3,379,442	-		OLJFJH_16040	0.54	-0.6
3,379,444	+		OLJFJH_16040	0.55	-3.1
3,379,445	-		OLJFJH_16040	0.55	-1.3
3,379,464	+		OLJFJH_16040	0.56	-0.7
3,379,561	+		OLJFJH_16040	0.65	-3.2
3,379,566	-		OLJFJH_16040	0.66	+1.0
3,379,584	-		OLJFJH_16040	0.67	-1.6
3,379,647	+		OLJFJH_16040	0.73	-2.0
3,379,647	+		OLJFJH_16040	0.73	+0.2
3,379,737	-		OLJFJH_16040	0.81	+0.7
3,379,787	+		OLJFJH_16040	0.86	-3.3
3,379,788	-		OLJFJH_16040	0.86	-0.1
3,379,788	-		OLJFJH_16040	0.86	-2.0
3,379,789	+		OLJFJH_16040	0.86	-1.1
3,379,789	+		OLJFJH_16040	0.86	-3.1
3,379,790	-		OLJFJH_16040	0.86	-0.8
3,379,793	+		OLJFJH_16040	0.86	+1.2
3,379,793	+		OLJFJH_16040	0.86	+0.7
3,379,811	+		OLJFJH_16040	0.88	-1.5
3,379,811	+		OLJFJH_16040	0.88	-2.2
3,379,811	+		OLJFJH_16040	0.88	-1.4
3,379,811	+		OLJFJH_16040	0.88	-2.9
3,379,812	-		OLJFJH_16040	0.88	-1.7
3,379,812	-		OLJFJH_16040	0.88	-1.0
3,379,812	-		OLJFJH_16040	0.88	-1.4
3,379,814	+		OLJFJH_16040	0.88	-1.0
3,379,815	-		OLJFJH_16040	0.88	+1.4
3,379,815	-		OLJFJH_16040	0.88	-2.9
3,379,817	+		OLJFJH_16040	0.88	-1.5
3,379,818	-		OLJFJH_16040	0.88	-1.6
3,379,831	+		OLJFJH_16040	0.90	-2.4
3,379,841	+				-0.0
3,379,842	-				-0.4
3,379,842	-				-0.6
3,379,842	-				+0.3
3,379,932	+				-2.6
3,379,935	-				-1.9
3,379,943	+				+0.5
3,379,943	+				+0.2
3,379,943	+				+0.6
3,379,944	-				-2.0
3,379,944	-				-0.4
3,379,944	-				-0.6
3,379,947	+				-0.3
3,379,948	-				-0.1
3,379,948	-				-1.1
3,380,056	-				+0.1
3,380,121	+				-0.9
3,380,153	-				-2.4
3,380,176	+				-0.1
3,380,176	+				-0.9
3,380,189	-				-1.6
3,380,213	-				+2.0
3,380,282	+				-1.3
3,380,285	-				-1.4
3,380,408	-		OLJFJH_16045	0.19	+0.3
3,380,408	-		OLJFJH_16045	0.19	-1.0
3,380,621	+		OLJFJH_16045	0.37	-0.2
3,380,622	-		OLJFJH_16045	0.37	-1.1
3,380,622	-		OLJFJH_16045	0.37	-0.7
3,380,624	+		OLJFJH_16045	0.38	-2.3
3,380,625	-		OLJFJH_16045	0.38	+1.4
3,380,625	-		OLJFJH_16045	0.38	+1.5
3,380,674	+		OLJFJH_16045	0.42	-0.9
3,380,674	+		OLJFJH_16045	0.42	-0.6
3,380,695	+		OLJFJH_16045	0.43	-0.7
3,380,696	-		OLJFJH_16045	0.44	-3.3
3,380,907	-		OLJFJH_16045	0.61	-1.2
3,380,927	+		OLJFJH_16045	0.63	-0.3
3,380,927	+		OLJFJH_16045	0.63	-0.2
3,380,928	-		OLJFJH_16045	0.63	-2.8