Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_16035 and OLJFJH_16040 are separated by 301 nucleotides OLJFJH_16040 and OLJFJH_16045 are separated by 231 nucleotides
OLJFJH_16035: OLJFJH_16035 - asparagine--tRNA ligase, at 3,377,140 to 3,378,540
_16035
OLJFJH_16040: OLJFJH_16040 - Outer membrane porin OmpC/OmpF/PhoE, at 3,378,842 to 3,379,945
_16040
OLJFJH_16045: OLJFJH_16045 - aromatic amino acid aminotransferase, at 3,380,177 to 3,381,367
_16045
Position (kb)
3378
3379
3380 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3378.712 kb on - strand at 3378.818 kb on + strand at 3378.819 kb on - strand at 3378.917 kb on + strand at 3379.011 kb on - strand, within OLJFJH_16040 at 3379.080 kb on - strand, within OLJFJH_16040 at 3379.087 kb on - strand, within OLJFJH_16040 at 3379.114 kb on + strand, within OLJFJH_16040 at 3379.189 kb on + strand, within OLJFJH_16040 at 3379.305 kb on - strand, within OLJFJH_16040 at 3379.309 kb on + strand, within OLJFJH_16040 at 3379.439 kb on + strand, within OLJFJH_16040 at 3379.439 kb on + strand, within OLJFJH_16040 at 3379.439 kb on + strand, within OLJFJH_16040 at 3379.439 kb on + strand, within OLJFJH_16040 at 3379.439 kb on + strand, within OLJFJH_16040 at 3379.440 kb on - strand, within OLJFJH_16040 at 3379.440 kb on - strand, within OLJFJH_16040 at 3379.440 kb on - strand, within OLJFJH_16040 at 3379.440 kb on - strand, within OLJFJH_16040 at 3379.440 kb on - strand, within OLJFJH_16040 at 3379.440 kb on - strand, within OLJFJH_16040 at 3379.440 kb on - strand, within OLJFJH_16040 at 3379.442 kb on - strand, within OLJFJH_16040 at 3379.444 kb on + strand, within OLJFJH_16040 at 3379.445 kb on - strand, within OLJFJH_16040 at 3379.464 kb on + strand, within OLJFJH_16040 at 3379.561 kb on + strand, within OLJFJH_16040 at 3379.566 kb on - strand, within OLJFJH_16040 at 3379.584 kb on - strand, within OLJFJH_16040 at 3379.647 kb on + strand, within OLJFJH_16040 at 3379.647 kb on + strand, within OLJFJH_16040 at 3379.737 kb on - strand, within OLJFJH_16040 at 3379.787 kb on + strand, within OLJFJH_16040 at 3379.788 kb on - strand, within OLJFJH_16040 at 3379.788 kb on - strand, within OLJFJH_16040 at 3379.789 kb on + strand, within OLJFJH_16040 at 3379.789 kb on + strand, within OLJFJH_16040 at 3379.790 kb on - strand, within OLJFJH_16040 at 3379.793 kb on + strand, within OLJFJH_16040 at 3379.793 kb on + strand, within OLJFJH_16040 at 3379.811 kb on + strand, within OLJFJH_16040 at 3379.811 kb on + strand, within OLJFJH_16040 at 3379.811 kb on + strand, within OLJFJH_16040 at 3379.811 kb on + strand, within OLJFJH_16040 at 3379.812 kb on - strand, within OLJFJH_16040 at 3379.812 kb on - strand, within OLJFJH_16040 at 3379.812 kb on - strand, within OLJFJH_16040 at 3379.814 kb on + strand, within OLJFJH_16040 at 3379.815 kb on - strand, within OLJFJH_16040 at 3379.815 kb on - strand, within OLJFJH_16040 at 3379.817 kb on + strand, within OLJFJH_16040 at 3379.818 kb on - strand, within OLJFJH_16040 at 3379.831 kb on + strand, within OLJFJH_16040 at 3379.841 kb on + strand at 3379.842 kb on - strand at 3379.842 kb on - strand at 3379.842 kb on - strand at 3379.932 kb on + strand at 3379.935 kb on - strand at 3379.943 kb on + strand at 3379.943 kb on + strand at 3379.943 kb on + strand at 3379.944 kb on - strand at 3379.944 kb on - strand at 3379.944 kb on - strand at 3379.947 kb on + strand at 3379.948 kb on - strand at 3379.948 kb on - strand at 3380.056 kb on - strand at 3380.121 kb on + strand at 3380.153 kb on - strand at 3380.176 kb on + strand at 3380.176 kb on + strand at 3380.189 kb on - strand at 3380.213 kb on - strand at 3380.282 kb on + strand at 3380.285 kb on - strand at 3380.408 kb on - strand, within OLJFJH_16045 at 3380.408 kb on - strand, within OLJFJH_16045 at 3380.621 kb on + strand, within OLJFJH_16045 at 3380.622 kb on - strand, within OLJFJH_16045 at 3380.622 kb on - strand, within OLJFJH_16045 at 3380.624 kb on + strand, within OLJFJH_16045 at 3380.625 kb on - strand, within OLJFJH_16045 at 3380.625 kb on - strand, within OLJFJH_16045 at 3380.674 kb on + strand, within OLJFJH_16045 at 3380.674 kb on + strand, within OLJFJH_16045 at 3380.695 kb on + strand, within OLJFJH_16045 at 3380.696 kb on - strand, within OLJFJH_16045 at 3380.907 kb on - strand, within OLJFJH_16045 at 3380.927 kb on + strand, within OLJFJH_16045 at 3380.927 kb on + strand, within OLJFJH_16045 at 3380.928 kb on - strand, within OLJFJH_16045
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8 remove 3,378,712 - -1.3 3,378,818 + +0.1 3,378,819 - -2.0 3,378,917 + -1.5 3,379,011 - OLJFJH_16040 0.15 +0.5 3,379,080 - OLJFJH_16040 0.22 -0.9 3,379,087 - OLJFJH_16040 0.22 -0.8 3,379,114 + OLJFJH_16040 0.25 -0.6 3,379,189 + OLJFJH_16040 0.31 -3.1 3,379,305 - OLJFJH_16040 0.42 -2.3 3,379,309 + OLJFJH_16040 0.42 -0.8 3,379,439 + OLJFJH_16040 0.54 -3.3 3,379,439 + OLJFJH_16040 0.54 -1.3 3,379,439 + OLJFJH_16040 0.54 -0.5 3,379,439 + OLJFJH_16040 0.54 +1.2 3,379,439 + OLJFJH_16040 0.54 -1.6 3,379,440 - OLJFJH_16040 0.54 +0.4 3,379,440 - OLJFJH_16040 0.54 -0.9 3,379,440 - OLJFJH_16040 0.54 -0.1 3,379,440 - OLJFJH_16040 0.54 -0.1 3,379,440 - OLJFJH_16040 0.54 -0.8 3,379,440 - OLJFJH_16040 0.54 +1.8 3,379,440 - OLJFJH_16040 0.54 -0.1 3,379,442 - OLJFJH_16040 0.54 -0.6 3,379,444 + OLJFJH_16040 0.55 -3.1 3,379,445 - OLJFJH_16040 0.55 -1.3 3,379,464 + OLJFJH_16040 0.56 -0.7 3,379,561 + OLJFJH_16040 0.65 -3.2 3,379,566 - OLJFJH_16040 0.66 +1.0 3,379,584 - OLJFJH_16040 0.67 -1.6 3,379,647 + OLJFJH_16040 0.73 -2.0 3,379,647 + OLJFJH_16040 0.73 +0.2 3,379,737 - OLJFJH_16040 0.81 +0.7 3,379,787 + OLJFJH_16040 0.86 -3.3 3,379,788 - OLJFJH_16040 0.86 -0.1 3,379,788 - OLJFJH_16040 0.86 -2.0 3,379,789 + OLJFJH_16040 0.86 -1.1 3,379,789 + OLJFJH_16040 0.86 -3.1 3,379,790 - OLJFJH_16040 0.86 -0.8 3,379,793 + OLJFJH_16040 0.86 +1.2 3,379,793 + OLJFJH_16040 0.86 +0.7 3,379,811 + OLJFJH_16040 0.88 -1.5 3,379,811 + OLJFJH_16040 0.88 -2.2 3,379,811 + OLJFJH_16040 0.88 -1.4 3,379,811 + OLJFJH_16040 0.88 -2.9 3,379,812 - OLJFJH_16040 0.88 -1.7 3,379,812 - OLJFJH_16040 0.88 -1.0 3,379,812 - OLJFJH_16040 0.88 -1.4 3,379,814 + OLJFJH_16040 0.88 -1.0 3,379,815 - OLJFJH_16040 0.88 +1.4 3,379,815 - OLJFJH_16040 0.88 -2.9 3,379,817 + OLJFJH_16040 0.88 -1.5 3,379,818 - OLJFJH_16040 0.88 -1.6 3,379,831 + OLJFJH_16040 0.90 -2.4 3,379,841 + -0.0 3,379,842 - -0.4 3,379,842 - -0.6 3,379,842 - +0.3 3,379,932 + -2.6 3,379,935 - -1.9 3,379,943 + +0.5 3,379,943 + +0.2 3,379,943 + +0.6 3,379,944 - -2.0 3,379,944 - -0.4 3,379,944 - -0.6 3,379,947 + -0.3 3,379,948 - -0.1 3,379,948 - -1.1 3,380,056 - +0.1 3,380,121 + -0.9 3,380,153 - -2.4 3,380,176 + -0.1 3,380,176 + -0.9 3,380,189 - -1.6 3,380,213 - +2.0 3,380,282 + -1.3 3,380,285 - -1.4 3,380,408 - OLJFJH_16045 0.19 +0.3 3,380,408 - OLJFJH_16045 0.19 -1.0 3,380,621 + OLJFJH_16045 0.37 -0.2 3,380,622 - OLJFJH_16045 0.37 -1.1 3,380,622 - OLJFJH_16045 0.37 -0.7 3,380,624 + OLJFJH_16045 0.38 -2.3 3,380,625 - OLJFJH_16045 0.38 +1.4 3,380,625 - OLJFJH_16045 0.38 +1.5 3,380,674 + OLJFJH_16045 0.42 -0.9 3,380,674 + OLJFJH_16045 0.42 -0.6 3,380,695 + OLJFJH_16045 0.43 -0.7 3,380,696 - OLJFJH_16045 0.44 -3.3 3,380,907 - OLJFJH_16045 0.61 -1.2 3,380,927 + OLJFJH_16045 0.63 -0.3 3,380,927 + OLJFJH_16045 0.63 -0.2 3,380,928 - OLJFJH_16045 0.63 -2.8
Or see this region's nucleotide sequence