Strain Fitness in Erwinia amylovora T8 around OLJFJH_15450

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
3,258,638	+		OLJFJH_15445	0.75	+0.3
3,258,638	+		OLJFJH_15445	0.75	-0.7
3,258,641	+		OLJFJH_15445	0.76	+0.5
3,258,642	-		OLJFJH_15445	0.76	+3.9
3,258,642	-		OLJFJH_15445	0.76	+0.3
3,258,645	-		OLJFJH_15445	0.76	+0.2
3,258,645	-		OLJFJH_15445	0.76	+1.5
3,258,645	-		OLJFJH_15445	0.76	-0.0
3,258,768	+		OLJFJH_15445	0.79	-1.0
3,258,769	-		OLJFJH_15445	0.79	-0.0
3,258,795	-		OLJFJH_15445	0.80	+0.4
3,258,960	+		OLJFJH_15445	0.85	+1.0
3,258,960	+		OLJFJH_15445	0.85	-0.5
3,258,960	+		OLJFJH_15445	0.85	-1.8
3,258,960	+		OLJFJH_15445	0.85	-0.3
3,258,960	+		OLJFJH_15445	0.85	-0.8
3,258,960	+		OLJFJH_15445	0.85	+1.2
3,258,960	+		OLJFJH_15445	0.85	+0.2
3,258,961	-		OLJFJH_15445	0.85	-3.7
3,258,961	-		OLJFJH_15445	0.85	-0.0
3,258,961	-		OLJFJH_15445	0.85	-0.8
3,258,961	-		OLJFJH_15445	0.85	-2.9
3,258,962	+		OLJFJH_15445	0.85	+0.4
3,259,058	+		OLJFJH_15445	0.88	+0.3
3,259,084	-		OLJFJH_15445	0.88	-1.7
3,259,084	-		OLJFJH_15445	0.88	+0.3
3,259,118	+		OLJFJH_15445	0.89	-0.1
3,259,125	-		OLJFJH_15445	0.90	+0.9
3,259,163	+				-0.1
3,259,163	+				-1.3
3,259,164	-				+0.6
3,259,271	-				+5.2
3,259,271	-				-0.6
3,259,271	-				+0.8
3,259,349	-				+0.5
3,259,555	+				+0.9
3,259,555	+				+0.8
3,259,555	+				+0.6
3,259,556	-				-0.3
3,259,556	-				-1.8
3,259,563	+				+0.1
3,259,574	-				+0.2
3,259,624	+				+1.9
3,259,718	-		OLJFJH_15450	0.19	-0.9
3,259,719	+		OLJFJH_15450	0.19	-0.0
3,259,719	+		OLJFJH_15450	0.19	+0.3
3,259,720	-		OLJFJH_15450	0.19	-0.4
3,259,723	+		OLJFJH_15450	0.20	-1.3
3,259,723	+		OLJFJH_15450	0.20	-3.5
3,259,724	-		OLJFJH_15450	0.20	-2.9
3,259,724	-		OLJFJH_15450	0.20	-3.1
3,259,758	+		OLJFJH_15450	0.26	-1.6
3,259,758	+		OLJFJH_15450	0.26	-1.4
3,259,791	+		OLJFJH_15450	0.32	-1.7
3,259,791	+		OLJFJH_15450	0.32	+0.7
3,259,792	-		OLJFJH_15450	0.33	-1.1
3,259,795	+		OLJFJH_15450	0.33	-2.0
3,259,795	+		OLJFJH_15450	0.33	+0.0
3,259,836	+		OLJFJH_15450	0.41	-0.5
3,259,908	-		OLJFJH_15450	0.54	-1.0
3,260,027	-		OLJFJH_15450	0.76	-0.1
3,260,084	-		OLJFJH_15450	0.87	+0.1
3,260,084	-		OLJFJH_15450	0.87	-1.5
3,260,129	+				-0.8
3,260,130	-				-0.8
3,260,130	-				-0.2
3,260,143	+				+0.7
3,260,149	+				-4.3
3,260,149	+				-1.0
3,260,150	-				-0.8
3,260,195	+				-0.5
3,260,215	-				-0.2
3,260,221	+				-0.7
3,260,222	-				+0.5
3,260,271	+				-2.5
3,260,324	+				-0.5
3,260,334	+				+1.0
3,260,335	-				+0.5
3,260,347	-				+2.1
3,260,433	+				+0.7
3,260,918	-		OLJFJH_15455	0.35	-0.6