Strain Fitness in Erwinia amylovora T8 around OLJFJH_15050
Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8 |
---|---|---|---|---|---|
remove | |||||
3,177,772 | + | OLJFJH_15045 | 0.67 | -0.7 | |
3,178,393 | - | +0.1 | |||
3,178,753 | + | OLJFJH_15050 | 0.23 | -0.5 | |
3,178,962 | - | OLJFJH_15050 | 0.42 | -1.8 | |
3,179,885 | + | OLJFJH_15055 | 0.15 | -0.7 | |
3,179,886 | - | OLJFJH_15055 | 0.15 | -0.4 | |
3,180,019 | - | OLJFJH_15055 | 0.22 | +0.4 | |
3,180,257 | + | OLJFJH_15055 | 0.36 | +0.7 | |
3,180,606 | - | OLJFJH_15055 | 0.56 | +0.8 |
Or see this region's nucleotide sequence