Strain Fitness in Erwinia amylovora T8 around OLJFJH_13495

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
2,838,808	+		OLJFJH_13485	0.73	-1.8
2,838,809	-		OLJFJH_13485	0.73	-2.5
2,838,809	-		OLJFJH_13485	0.73	-1.6
2,838,812	+		OLJFJH_13485	0.74	-0.6
2,838,813	-		OLJFJH_13485	0.74	-0.2
2,838,813	-		OLJFJH_13485	0.74	+1.2
2,839,050	+				-0.3
2,839,069	+				-1.9
2,839,213	-		OLJFJH_13490	0.23	-0.4
2,839,470	+		OLJFJH_13490	0.66	-0.4
2,839,471	-		OLJFJH_13490	0.67	-0.4
2,839,471	-		OLJFJH_13490	0.67	-1.1
2,839,625	+				-0.9
2,839,625	+				-1.0
2,839,625	+				-0.9
2,839,625	+				-1.9
2,839,626	-				+1.8
2,839,626	-				-0.7
2,839,626	-				+1.0
2,839,727	+				-0.6
2,839,791	+				+1.1
2,839,792	-				-0.6
2,839,816	+				-1.7
2,839,817	-				-0.5
2,839,836	-		OLJFJH_13495	0.11	-0.5
2,839,885	+		OLJFJH_13495	0.14	-1.3
2,839,998	+		OLJFJH_13495	0.21	-1.4
2,839,998	+		OLJFJH_13495	0.21	-1.6
2,839,998	+		OLJFJH_13495	0.21	-1.1
2,839,998	+		OLJFJH_13495	0.21	-1.6
2,839,998	+		OLJFJH_13495	0.21	-2.2
2,839,998	+		OLJFJH_13495	0.21	-2.2
2,839,998	+		OLJFJH_13495	0.21	-1.5
2,839,998	+		OLJFJH_13495	0.21	-1.9
2,839,999	-		OLJFJH_13495	0.21	-0.6
2,839,999	-		OLJFJH_13495	0.21	+0.8
2,839,999	-		OLJFJH_13495	0.21	-0.4
2,839,999	-		OLJFJH_13495	0.21	-1.1
2,839,999	-		OLJFJH_13495	0.21	-0.7
2,839,999	-		OLJFJH_13495	0.21	-1.5
2,839,999	-		OLJFJH_13495	0.21	-1.0
2,839,999	-		OLJFJH_13495	0.21	-0.5
2,839,999	-		OLJFJH_13495	0.21	-0.9
2,839,999	-		OLJFJH_13495	0.21	-0.3
2,839,999	-		OLJFJH_13495	0.21	+0.5
2,840,001	-		OLJFJH_13495	0.21	-1.7
2,840,083	+		OLJFJH_13495	0.27	-0.7
2,840,083	+		OLJFJH_13495	0.27	-1.1
2,840,084	-		OLJFJH_13495	0.27	-1.6
2,840,112	+		OLJFJH_13495	0.28	-2.9
2,840,112	+		OLJFJH_13495	0.28	-0.7
2,840,112	+		OLJFJH_13495	0.28	-1.2
2,840,163	-		OLJFJH_13495	0.32	-0.1
2,840,354	+		OLJFJH_13495	0.44	-0.6
2,840,354	+		OLJFJH_13495	0.44	-0.8
2,840,354	+		OLJFJH_13495	0.44	-1.2
2,840,354	+		OLJFJH_13495	0.44	-0.9
2,840,354	+		OLJFJH_13495	0.44	+0.1
2,840,355	-		OLJFJH_13495	0.44	-0.1
2,840,355	-		OLJFJH_13495	0.44	+0.4
2,840,355	-		OLJFJH_13495	0.44	-2.3
2,840,355	-		OLJFJH_13495	0.44	+1.0
2,840,356	+		OLJFJH_13495	0.44	+1.1
2,840,357	-		OLJFJH_13495	0.44	-2.4
2,840,497	+		OLJFJH_13495	0.53	-0.6
2,840,498	-		OLJFJH_13495	0.53	-2.1
2,840,522	+		OLJFJH_13495	0.55	-1.0
2,840,532	-		OLJFJH_13495	0.55	-3.4
2,840,553	+		OLJFJH_13495	0.57	-0.6
2,840,829	+		OLJFJH_13495	0.74	-2.4
2,840,829	+		OLJFJH_13495	0.74	-2.5
2,840,863	-		OLJFJH_13495	0.76	-1.3
2,841,095	+				-0.4
2,841,096	-				-0.5
2,841,096	-				-1.1
2,841,245	-				+1.5
2,841,271	-				+1.3
2,841,297	+				-1.9
2,841,365	-				-0.8
2,841,385	-				-1.8
2,841,385	-				-2.4
2,841,385	-				-0.4
2,841,439	-				-0.5
2,841,439	-				-0.6
2,841,452	+				+0.1
2,841,480	+				-0.8
2,841,480	+				+0.3
2,841,480	+				+1.0
2,841,480	+				-1.1
2,841,481	-				-0.7
2,841,481	-				-0.4
2,841,582	+				-1.1
2,841,583	-				+3.0
2,841,628	-		OLJFJH_13500	0.13	+0.1
2,841,766	+		OLJFJH_13500	0.29	+0.4
2,841,766	+		OLJFJH_13500	0.29	-2.9
2,841,767	-		OLJFJH_13500	0.29	-2.2
2,841,767	-		OLJFJH_13500	0.29	-1.0
2,841,883	+		OLJFJH_13500	0.41	-1.7
2,841,884	-		OLJFJH_13500	0.41	-0.5
2,841,985	+		OLJFJH_13500	0.53	-1.0
2,842,051	+		OLJFJH_13500	0.60	+1.1
2,842,051	+		OLJFJH_13500	0.60	+0.1
2,842,057	+		OLJFJH_13500	0.60	-0.7