Strain Fitness in Erwinia amylovora T8 around OLJFJH_13340

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-8
2,805,832	+		OLJFJH_13330	0.34	+0.5
2,806,035	+		OLJFJH_13330	0.73	+0.6
2,806,383	+		OLJFJH_13335	0.42	+0.0
2,806,640	+				+0.3
2,806,642	+				-1.5
2,806,643	-				+0.2
2,806,643	-				-1.0
2,806,643	-				+0.6
2,806,643	-				+0.3
2,806,788	-				-1.7
2,806,852	+				-0.4
2,806,852	+				-1.2
2,806,853	-				-4.0
2,807,061	+		OLJFJH_13340	0.30	+0.5
2,807,061	+		OLJFJH_13340	0.30	-0.4
2,807,062	-		OLJFJH_13340	0.31	-2.6
2,807,197	+		OLJFJH_13340	0.46	-1.1
2,807,323	+		OLJFJH_13340	0.60	-1.7
2,807,323	+		OLJFJH_13340	0.60	-0.4
2,807,324	-		OLJFJH_13340	0.60	-0.8
2,807,324	-		OLJFJH_13340	0.60	-1.4
2,807,324	-		OLJFJH_13340	0.60	-3.3
2,808,481	-		OLJFJH_13345	0.73	-0.8
2,808,542	+		OLJFJH_13345	0.79	-2.7
2,808,542	+		OLJFJH_13345	0.79	+0.9
2,808,625	+		OLJFJH_13345	0.87	-1.2
2,808,665	-				-2.9